Pairwise Alignments

Query, 328 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 391 a.a., Nucleoside ABC transporter, substrate-binding protein from Variovorax sp. SCN45

 Score =  151 bits (382), Expect = 2e-41
 Identities = 102/306 (33%), Positives = 161/306 (52%), Gaps = 13/306 (4%)

Query: 23  ALAPAVRASAPIKVAGVHASPVENAWNSVLH----KALQDAAAEGVIEYVFSEGI-SGTD 77
           A APA   +AP+ +A  +  PV +   S  H    KAL+    +  I+  F E +  G D
Sbjct: 46  AAAPAPATAAPLNIAFAYVGPVGDGGWSFAHDNARKALEKEFGDK-IKTTFVESVPEGAD 104

Query: 78  YPRAMREYAEQGAKLIIGEAYAVEKQAREVAADYPETAFVLGSSGKESGDNFGVFGTWNH 137
             R  R++  QG KLI G  +   +   +VAAD  +  F   ++G ++ +N   + +  +
Sbjct: 105 AERVFRDFVSQGNKLIFGTTFGYMEPMLKVAADNKDVKFE-HATGYKTSENMRTYDSRTY 163

Query: 138 DGAYLAGMLAGKMTKSNVVGSVGAMPIPEVNMLINAFAAGVKAVNPDAKHLVTFIGTFFD 197
           +GAY+AG++AG MTKSN +G VG++PIPEV   IN+F  G ++VNP     V ++  +F 
Sbjct: 164 EGAYMAGVIAGAMTKSNTLGVVGSVPIPEVLRNINSFTLGAQSVNPKITTKVVWVNEWFS 223

Query: 198 PPKAREAGLAQIDAGADILFGERIGTA--DAAKERGLKSVGSLIDYTPRYPDTVFANALW 255
           PPK  EA  A I+ GAD+LF      A    A+E+G ++ G   D T   P    A+A+ 
Sbjct: 224 PPKETEAATALINGGADVLFQNTDSPAVLKTAQEKGKRAFGWDSDMTAYGPKAHLASAVI 283

Query: 256 GFRPILNAAIADVSAGK-PVGKDYTAFGLLKEGGSDVAYVKGVAPADAEAAMEAKRAEIK 314
            + P    A  +   GK   G+   A+  +KEG  D+  +    PA+A+A ++  +  +K
Sbjct: 284 NWTPYYVKATQEALDGKWTTGQ---AWWGVKEGAIDLVSIAEDVPAEAKAKVDEVKKGLK 340

Query: 315 SGAFEV 320
            G+F +
Sbjct: 341 DGSFVI 346