Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 395 a.a., DNA polymerase IV (EC 2.7.7.7) from Variovorax sp. SCN45

 Score =  181 bits (460), Expect = 2e-50
 Identities = 126/367 (34%), Positives = 185/367 (50%), Gaps = 37/367 (10%)

Query: 24  MDAFYASVEQRDNPELRGKPVAVG------------YPEA-------------------R 52
           MDAFYASVE    P+L+G+PV +G             PE                    R
Sbjct: 1   MDAFYASVELLRYPQLKGRPVVIGGGRRRVDEAIRDLPEGGTLADIPVESFPLLKDYTGR 60

Query: 53  GVVAAASYEARKFGVHSAMPSVTAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVE 112
           GV+  A+Y AR+FGV SAM  + A + CP+ I +P  FD YR  SR  + +  E  PL+E
Sbjct: 61  GVITTATYPARQFGVGSAMGLMKAAKLCPQAIILPVDFDEYRRFSRAFKQVILEVAPLME 120

Query: 113 PLSLDEAYLDVTENFRGLKLA-TEIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRK 171
              +DE Y+D T+   G +     +A  ++  I   T LT S GV+ NK +AKMAS+  K
Sbjct: 121 DRGVDEVYIDFTDVPGGQRDGGRSLARLLQKAILDATGLTCSIGVAPNKLIAKMASEFNK 180

Query: 172 PDGLFVITPKHGPDFVQALPVKKFHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGK 231
           P+G+ ++        +  LP +K +G+GP   EK+KR GIET   L +RD  +L  +FGK
Sbjct: 181 PNGISIVYEDDLEKLIWPLPCRKVNGIGPKADEKLKRFGIETVGQLAARDRDWLVANFGK 240

Query: 232 -SGPYFYWIARGIDERKVKPDRIRKSIGAEDTFREDVH---DLETARAGLKPLIDKVWHY 287
            +G + + +A G D R V  +    S+  E TF  D+H   D     A    L ++V   
Sbjct: 241 ATGAWMHEVAWGRDNRPVVTESEPVSMSRETTFDRDLHAVRDRAELGAIFTRLCEQVAAD 300

Query: 288 CEASGIRGKTMTLKVKWADFTQITRSKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLL 347
            +  G  GKT+ +K+++ DF   TR +TI    A    + +     L  + P  + +RLL
Sbjct: 301 LQRKGYVGKTIGIKLRYDDFKIATRDQTIGHFTADARTIRQTGGQCLKRV-PLERPLRLL 359

Query: 348 GVTLSSL 354
           GV + +L
Sbjct: 360 GVRVGAL 366