Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 415 a.a., DNA polymerase IV from Variovorax sp. OAS795

 Score =  196 bits (497), Expect = 1e-54
 Identities = 134/375 (35%), Positives = 194/375 (51%), Gaps = 37/375 (9%)

Query: 16  VRKIIHIDMDAFYASVEQRDNPELRGKPVAVG------------YPEA------------ 51
           +R+I H+DMDAF+ASVE    P+L+G PV +G             PE             
Sbjct: 11  IRRIAHLDMDAFFASVELLRYPQLKGLPVVIGGGRRSVDEAIRHVPEGGTLADIPVSAFP 70

Query: 52  -------RGVVAAASYEARKFGVHSAMPSVTAKRKCPELIFVPHRFDVYRAVSRQIQAIF 104
                  RGV+  A+Y AR+FGV SAM  + A + CP+ I +P  FD  R  SR  + I 
Sbjct: 71  RLKDYAGRGVITTATYPARQFGVGSAMGLMKAAKLCPQAIILPVDFDEIRKYSRAFKEII 130

Query: 105 AEYTPLVEPLSLDEAYLDVTENFRGLKLA-TEIAEEIRGRIRAETHLTASAGVSYNKFLA 163
            E  PL+E   +DE Y+D T+   G +     +A  I+  I   T LT S GV+ NK +A
Sbjct: 131 REVAPLMEDRGVDEVYIDFTDVPGGQREGGRSLARLIQKAILDATGLTCSIGVAPNKLIA 190

Query: 164 KMASDQRKPDGLFVITPKHGPDFVQALPVKKFHGVGPATAEKMKRLGIETGADLKSRDLA 223
           KMAS+  KP+G+ V+        +  LP +K +G+GP   EK+KR GIET   L +RD  
Sbjct: 191 KMASEFNKPNGISVVYEDDLQARIWPLPCRKVNGIGPKADEKLKRFGIETVGQLAARDRD 250

Query: 224 FLQQHFGKS-GPYFYWIARGIDERKVKPDRIRKSIGAEDTFREDVH---DLETARAGLKP 279
           +L Q+FGKS G + + +A G D+R V  +    S+  E TF  D+H   D     A    
Sbjct: 251 WLIQNFGKSTGAWMHEVAWGRDDRPVVTESEPVSMSRETTFDRDLHAVRDRAELGAIFTH 310

Query: 280 LIDKVWHYCEASGIRGKTMTLKVKWADFTQITRSKTIVAPIASVAEMSEIAELLLSPIFP 339
           L +K+    +  G  GKT+ +K+++ DF   TR +TI    A    + ++  L L  + P
Sbjct: 311 LCEKLAEDLQRKGYVGKTIGIKLRYDDFKIATRDQTIDRHTADGKTIRQVGGLCLKRV-P 369

Query: 340 APKGIRLLGVTLSSL 354
             + +RLLGV + +L
Sbjct: 370 LERPLRLLGVRVGAL 384