Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 413 a.a., DNA polymerase IV (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  191 bits (486), Expect = 2e-53
 Identities = 134/388 (34%), Positives = 195/388 (50%), Gaps = 45/388 (11%)

Query: 11  SPGGRVRKIIHIDMDAFYASVEQRDNPELRGKPVAVG----------------YPE---- 50
           SP  R+R+I H+DMDAF+ASVE    P+L+G PV +G                YPE    
Sbjct: 7   SPTARLRRIAHLDMDAFFASVELLRYPQLKGLPVVIGGGRRREDDMFARLRETYPEREWT 66

Query: 51  -------------------ARGVVAAASYEARKFGVHSAMPSVTAKRKCPELIFVPHRFD 91
                               RGV   A+Y AR+FGV SAM  + A + CP+ I +P  FD
Sbjct: 67  GDDLAHIPIEFFPLLENYVGRGVATTATYAARQFGVGSAMGLMKAAKLCPQAILLPVDFD 126

Query: 92  VYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLATEI-AEEIRGRIRAETHL 150
             R +SR  +    E  P++E   +DE Y+D T+   G +    + A  I+  I   T L
Sbjct: 127 EVRRISRLFKHTIREIAPVMEDRGVDEVYIDFTDVPGGQREGGRVLARLIQKSIFQATGL 186

Query: 151 TASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKKFHGVGPATAEKMKRLG 210
           T S GV+ NK +AKMAS+ +KP+G+ ++        +  LP +K +GVGP    K++  G
Sbjct: 187 TCSLGVAPNKLIAKMASEFQKPNGISIVHTDDLQTLIWPLPCRKINGVGPKADAKLQGHG 246

Query: 211 IETGADLKSRDLAFLQQHFGKS-GPYFYWIARGIDERKVKPDRIRKSIGAEDTFREDVH- 268
           I T  DL  RD  +L +HFGKS G + + ++ G DER V+ +    S+  E TF  D+H 
Sbjct: 247 IHTIGDLAQRDRPWLVEHFGKSYGAWLHEVSWGRDERTVQTESEPVSMSRETTFDRDLHA 306

Query: 269 --DLETARAGLKPLIDKVWHYCEASGIRGKTMTLKVKWADFTQITRSKTIVAPIASVAEM 326
             D     A    L ++V    +  G  GKT+ +K+++ +F  +TR  TI    +  A +
Sbjct: 307 VRDRAELGAIFTQLCEQVADDLQRKGYVGKTIGVKLRYDNFQIVTRDSTIGHFTSDAASI 366

Query: 327 SEIAELLLSPIFPAPKGIRLLGVTLSSL 354
              A L L  +    + IRLLGV + SL
Sbjct: 367 RRQAGLCLKRV-DLTRRIRLLGVRVGSL 393