Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 385 a.a., DNA polymerase IV from Methylophilus sp. DMC18

 Score =  192 bits (489), Expect = 1e-53
 Identities = 125/379 (32%), Positives = 195/379 (51%), Gaps = 32/379 (8%)

Query: 17  RKIIHIDMDAFYASVEQRDNPELRGKPVAVGYPEA---------------------RGVV 55
           R+I HIDMDAF+AS E    PEL+G P+ V    +                     RGV+
Sbjct: 7   RRIAHIDMDAFFASCELSRYPELKGLPMVVAGGSSHVPRIREDGTREFSRLRDYAGRGVL 66

Query: 56  AAASYEARKFGVHSAMPSVTAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLS 115
             A+YEAR  G++SAMP++ A +  P+ + +P  F++YR  S+  +A     +P VE + 
Sbjct: 67  TTATYEARALGLNSAMPTMQAAKLAPDAVLLPVNFELYRHYSQLFKAAIRSISPQVENIG 126

Query: 116 LDEAYLDVTENFRGLKLATEIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGL 175
           +DE Y DV+        ATEIA++++  + A T LT S G++ NK LAK+ S+ +KPDG+
Sbjct: 127 IDEVYADVSALPGD---ATEIAQQLKSAVFAATGLTCSVGIAPNKLLAKLCSEMQKPDGI 183

Query: 176 FVITPKHGPDFVQALPVKKFHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFG-KSGP 234
            VIT    P  +  +  KK +G+GP  + K++ L I+T   + +   A+L QHFG + G 
Sbjct: 184 TVITMSDVPSRIWPMAAKKINGIGPKASAKLESLQIKTIGQIAAMSEAWLVQHFGNRYGR 243

Query: 235 YFYWIARGIDERKVKPDRIRKSIGAEDTFREDVH---DLETARAGLKPLIDKVWHYCEAS 291
           + Y ++RG D+R V  + +  S+  E TF  ++H   D          L ++V +  +  
Sbjct: 244 WLYRVSRGQDDRPVVTESVPVSMSRETTFERNLHPVRDKPALSEAFTRLCERVANDLQKK 303

Query: 292 GIRGKTMTLKVKWADFTQITRSKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGVTL 351
           G     + +K+++ DF  +TR  T+   I+    +   A   L  I    K IRLLGV  
Sbjct: 304 GYTCCKVGIKLRFEDFKTVTRDLTLPTAISDAKSLRLFAGKCLKRI-NLDKRIRLLGVKT 362

Query: 352 SSL---DTVDDRSEPQLAL 367
           S L   D ++     Q  L
Sbjct: 363 SGLLRADRINQTDSAQFTL 381