Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 351 a.a., DNA polymerase IV (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  263 bits (671), Expect = 7e-75
 Identities = 157/358 (43%), Positives = 220/358 (61%), Gaps = 11/358 (3%)

Query: 16  VRKIIHIDMDAFYASVEQRDNPELRGKPVAVGYP-EARGVVAAASYEARKFGVHSAMPSV 74
           +RKIIH+DMD F+A+VE RDNP LR  P+A+G   E RGV++ A+Y AR+FGV SAMP+ 
Sbjct: 1   MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARQFGVRSAMPTA 60

Query: 75  TAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLAT 134
            A + CP L  +P RFD Y+  SR ++ IF+ YT L+EPLSLDEA+LDVT++      AT
Sbjct: 61  MALKLCPHLTLLPGRFDAYKEASRHVRDIFSRYTSLIEPLSLDEAWLDVTDSPHCYGSAT 120

Query: 135 EIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKK 194
            IA EIR  I  E  LTASAGV+  KFLAK+ASD  KP+G +VITP   PDF++ LP+ K
Sbjct: 121 LIAREIRQTIFNELQLTASAGVAPVKFLAKIASDLNKPNGQYVITPADVPDFLKTLPLAK 180

Query: 195 FHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIR 254
             GVG  +A K++ +G+ T  D++  DLA L + FGK G   +  ++GIDER V  +R+R
Sbjct: 181 IPGVGKVSAAKLENMGLRTCGDIQQCDLAMLLKRFGKFGRVLWERSQGIDERDVNSERLR 240

Query: 255 KSIGAEDTFREDVH---DLETARAGLKPLIDKVWHYCEASGIRGKTMTLKVKWADFTQIT 311
           KS+G E T  ED+H   D E     L P +++     +   +  +   +K+K+ DF Q T
Sbjct: 241 KSVGVERTLAEDIHEWSDCEAIIEHLYPELERRLAIVKPDLLIAR-QGVKLKFNDFQQTT 299

Query: 312 RSKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGVTLSSLDTVDDRSEPQLALAL 369
           +    V P  +  ++   A           +G+RL+G+ ++ L   D + E QL L L
Sbjct: 300 QEH--VWPQLNKEDLITTARKTWDE-RRGERGVRLVGLHVTLL---DPQLERQLVLGL 351