Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 369 a.a., Nucleotidyltransferase/DNA polymerase involved in DNA repair from Kangiella aquimarina DSM 16071

 Score =  270 bits (691), Expect = 4e-77
 Identities = 160/344 (46%), Positives = 208/344 (60%), Gaps = 8/344 (2%)

Query: 9   PPSPGGRVRKIIHIDMDAFYASVEQRDNPELRGKPVAVG-YPEARGVVAAASYEARKFGV 67
           P S    +RKIIH+DMD +YA++E RD P L+ +PVAVG  P+ RGV+A  +YEAR +GV
Sbjct: 4   PVSDTQPIRKIIHVDMDCYYAAIEMRDEPSLKNQPVAVGGSPDKRGVIATCNYEARSYGV 63

Query: 68  HSAMPSVTAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENF 127
            SAMPS  A+R CP L+ V   FD YR  S+ I+ IFA+YT L+EPLSLDEAYLDVTE  
Sbjct: 64  RSAMPSAYARRLCPGLVIVHPNFDKYRHDSKVIREIFAQYTDLIEPLSLDEAYLDVTECT 123

Query: 128 RGLKLATEIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFV 187
                AT IA+ IR +I  +  LTASAGV+ NKFLAK+ASD  KP+G FVITP+   DFV
Sbjct: 124 EYKGSATFIAQAIRYQIFEKLKLTASAGVAPNKFLAKIASDWNKPNGQFVITPEEVDDFV 183

Query: 188 QALPVKKFHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERK 247
           + LPV K HGVG  T EK+ R+GIE   +L+  DL  L + FG  G   Y ++RGID+R 
Sbjct: 184 KQLPVAKIHGVGKKTTEKLHRMGIENCKELREIDLLTLSKTFGSFGQRLYELSRGIDQRP 243

Query: 248 VKPDRIRKSIGAEDTFREDVHDLETARAGLKPLIDKVWHYCEASGIRGKTMTL--KVKWA 305
           V     RKS+  E+T+ +D+  LE     L  L+  +      SG+      L  K+K++
Sbjct: 244 VITHYPRKSLSVENTYDQDLITLEDCLDELPHLLQTLKRRVARSGVGAPINKLFAKLKFS 303

Query: 306 DFTQITRSKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGV 349
           DFT  T  +T               EL+        K +RLLG+
Sbjct: 304 DFTATTVERTSFG-----INDDLFYELMEEGFHRRQKTVRLLGI 342