Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 351 a.a., DNA polymerase IV from Erwinia tracheiphila SCR3

 Score =  249 bits (635), Expect = 1e-70
 Identities = 153/359 (42%), Positives = 215/359 (59%), Gaps = 13/359 (3%)

Query: 16  VRKIIHIDMDAFYASVEQRDNPELRGKPVAVGYPEA-RGVVAAASYEARKFGVHSAMPSV 74
           +RKIIHIDMD F+A+VE RDNP LR  P+A+G     RGV++ A+Y AR FGV+SAMP+ 
Sbjct: 1   MRKIIHIDMDCFFAAVEMRDNPSLRDIPIAIGGSHLKRGVISTANYPARTFGVYSAMPTA 60

Query: 75  TAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLAT 134
            A + CP L  +P RFD Y+  S  I+ IF+ YT L+EPLSLDEAYLDVT +      AT
Sbjct: 61  MAIKLCPHLKVIPGRFDAYKEASHHIREIFSRYTHLIEPLSLDEAYLDVTNSIHCYGSAT 120

Query: 135 EIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKK 194
            IA EIR  I  E  L+ASAG++  KFL+K+ASD  KP G FVITP   P  +  LP+ K
Sbjct: 121 LIAREIRQTIFRELGLSASAGIAPVKFLSKIASDLNKPGGQFVITPADIPAILLTLPLVK 180

Query: 195 FHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIR 254
             GVG  TA+K++ +G+ T  D+++ DL+ L + FGK G   +    GIDER+V  DR+R
Sbjct: 181 IPGVGKVTAKKLEAMGLLTCGDVQNSDLSALLKRFGKFGCGLWERCHGIDEREVVTDRLR 240

Query: 255 KSIGAEDTFREDVHDLETARAGLKPLIDKVWHYCEASGIRGKTMT----LKVKWADFTQI 310
           KS+G E T  ED+H  E     ++ L +++      + IR   +     +K+K+ DF Q 
Sbjct: 241 KSLGVERTLSEDIHHWEQCMTIIEVLYEELDR--RLAKIRQDRLIARQGVKLKFDDFQQT 298

Query: 311 TRSKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGVTLSSLDTVDDRSEPQLALAL 369
           T+    +  + +  +   +A+        A +G+RL+G+ +      D + E QL L L
Sbjct: 299 TQEH--LWSVLNKDDFMAVAKQSWDE-RRAGRGVRLVGLHVM---LADPQLERQLVLGL 351