Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 351 a.a., DNA polymerase IV from Escherichia coli ECRC62

 Score =  265 bits (676), Expect = 2e-75
 Identities = 160/361 (44%), Positives = 219/361 (60%), Gaps = 17/361 (4%)

Query: 16  VRKIIHIDMDAFYASVEQRDNPELRGKPVAVGYP-EARGVVAAASYEARKFGVHSAMPSV 74
           +RKIIH+DMD F+A+VE RDNP LR  P+A+G   E RGV++ A+Y ARKFGV SAMP+ 
Sbjct: 1   MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTG 60

Query: 75  TAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLAT 134
            A + CP L  +P RFD Y+  S  I+ IF+ YT  +EPLSLDEAYLDVT++      AT
Sbjct: 61  MALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSAT 120

Query: 135 EIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKK 194
            IA+EIR  I +E  LTASAGV+  KFLAK+ASD  KP+G FVITP   P F+Q LP+ K
Sbjct: 121 LIAQEIRQTIFSELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAK 180

Query: 195 FHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIR 254
             GVG  +A K++ +G+ T  D++  DL  L + FGK G   +  ++GIDER V  +R+R
Sbjct: 181 IPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLR 240

Query: 255 KSIGAEDTFREDVHDLETARAGLKPLIDKVWHYCEASGIRGKTMTL------KVKWADFT 308
           KS+G E T  ED+H      A    +I++++   E    + K   L      K+K+ DF 
Sbjct: 241 KSVGVERTMAEDIHHWSECEA----IIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQ 296

Query: 309 QITRSKTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGVTLSSLDTVDDRSEPQLALA 368
           Q T+    V P  + A++   A           +G+RL+G+ ++ L   D + E QL L 
Sbjct: 297 QTTQEH--VWPRLNKADLIATARKTWDE-RRGGRGVRLVGLHVTLL---DPQMERQLVLG 350

Query: 369 L 369
           L
Sbjct: 351 L 351