Pairwise Alignments

Query, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

Subject, 405 a.a., DNA polymerase IV from Agrobacterium fabrum C58

 Score =  213 bits (541), Expect = 1e-59
 Identities = 140/349 (40%), Positives = 190/349 (54%), Gaps = 5/349 (1%)

Query: 19  IIHIDMDAFYASVEQRDNPELRGKPVAVGYPEARGVVAAASYEARKFGVHSAMPSVTAKR 78
           I HID DAFYASVE+RDNPEL  KPV VG  + RGVV+ A Y AR  GV SAMP   A  
Sbjct: 23  IAHIDCDAFYASVEKRDNPELADKPVIVGGGK-RGVVSTACYIARIHGVRSAMPMFKALE 81

Query: 79  KCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDV--TENFRGLKLATEI 136
            CP+ + +    + Y  V R+I+ +  E TPLV+PLS+DEA+LD+  TE       A  +
Sbjct: 82  ACPDAVVIKPDMEKYSRVGREIRTMMQELTPLVQPLSIDEAFLDLSGTEKLHHDPPARVL 141

Query: 137 AEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKKFH 196
           A+   GR+  E  ++ SAG+SY KFLAK+ASD +KP G  V+       F+ A PV    
Sbjct: 142 AK-FTGRVEKEVGVSVSAGLSYCKFLAKVASDLQKPRGFSVVGEAEALSFLAARPVTTIW 200

Query: 197 GVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIRKS 256
           GVG A A  ++  GI   A L+  + + L + +G  G   + +ARGIDER V  +   KS
Sbjct: 201 GVGKAFAATLEADGIRMIAQLQEMEESELMRRYGVMGQRLFRLARGIDERHVHNNDPVKS 260

Query: 257 IGAEDTFREDVHDLETARAGLKPLIDKVWHYCEASGIRGKTMTLKVKWADFTQITRSKTI 316
           + +E TF  D+   E     L+ L +KV    + SGI G+T+ LK+K ADF   TR++ +
Sbjct: 261 VSSETTFFHDISRHEDLVPILRSLSEKVAWRLKKSGIAGQTVVLKMKTADFKSRTRNRRL 320

Query: 317 VAPIASVAEMSEIAELLLSPIFPAPKGIRLLGVTLSSLDTVDDRSEPQL 365
             P      +      LL       K  RL+G+ +S L        P L
Sbjct: 321 DDPTQLADRIFRTGLALLEKETDGTK-FRLIGIGVSDLRDAGLADPPDL 368