Pairwise Alignments

Query, 732 a.a., oxidoreductase from Sinorhizobium meliloti 1021

Subject, 751 a.a., Nicotinate dehydrogenase subunit B from Xanthobacter sp. DMC5

 Score =  108 bits (269), Expect = 1e-27
 Identities = 127/475 (26%), Positives = 184/475 (38%), Gaps = 95/475 (20%)

Query: 5   TPATTNPIDQGKVIGKPITRIDGPLKTTGKAIYAYEWHDPNTRYAYGYIVGSAIAKGRIR 64
           T   T+P D   V+ +P+ R+D P K TG A Y  +   P     +G IV       R+ 
Sbjct: 189 TSTLTDPRDF-TVMDRPVPRVDIPAKVTGGAAYVQDMRLPGM--VHGRIVRPPSYGARLV 245

Query: 65  SMDVAAARNAPGVIAVVTSDG-VGELKKGKYNTAKLFGGTEIQHYHQAIAVV----VAET 119
           ++D       PGV+ VV     +G + + ++        T IQ   +   +      A+ 
Sbjct: 246 ALDAGPVEAMPGVLKVVRDGAFLGVIAEQEW--------TAIQAMRRLATLARWEETAQL 297

Query: 120 FEEARAAAALVKVDYAEEKGAFDLAAAKDSAVKPEGGGDSGAGDFDAAFKAAPVKLDQVY 179
            +EAR   AL+ +              +D+ +   G  D           A    LD ++
Sbjct: 298 PDEARLPEALMALP------------TRDTPILEVGQPD-----------APSFTLDTLF 334

Query: 180 TTPDQSHAMMEPHASIAAWNGDDLTVWTSSQMIDWWRTDLATTLGIDKDKVHLMSPFIGG 239
           + P  +H  + P  +IA   GD +TVWT +Q +   R  LA  L +  +KV  +     G
Sbjct: 335 SRPYLAHGSIGPSCAIAYLEGDAMTVWTHTQGVYPLRDALAGLLAVPPEKVRCIHAEGAG 394

Query: 240 GFGVKLFLRADAVLAALAAREAKRPVKVALPRPFLMNNTTHRPATIQRIRIGAGRDGKIT 299
            +G      A A  A LA     RPV+V   R          P  + R+R   G DG I+
Sbjct: 395 CYGQNGADDAGADAAMLARALPGRPVRVQWMREQEHAWEPFGPGMVARVRAALGPDGAIS 454

Query: 300 AIAHESWSG----------------------------DLP---GGGPEVAVQQTRLLYAG 328
           A  H+ WS                             DLP   GGG   AV     LY  
Sbjct: 455 AWQHDVWSQSHMMRPGPPGTLLAARDKAEPFPPAPPVDLPMPEGGGDRNAVP----LYVL 510

Query: 329 ENRMTAMRLATLDLP-EGNAMRAPGEAPGMMALEIAIDEMAESLALDPVEFRIINDTQVD 387
            N   A+     D+P  G++MR+ G    + A+E  +DE+A     DPV+FR+       
Sbjct: 511 PN-ARAVNHFLPDMPLRGSSMRSLGGYLNVFAIESTMDELARRAGQDPVDFRL------- 562

Query: 388 PENPERPFSHRNLVGCLRTGAERFGWRERSKQPGARREGNWLIGMGVAAAFRNNL 442
                R          + T AERFGW++R K P          G G A A   NL
Sbjct: 563 -----RHLQDERAKAVITTAAERFGWKDRPKPPSGG-------GYGFAFARYKNL 605



 Score = 47.0 bits (110), Expect = 4e-09
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 6/134 (4%)

Query: 591 VEVAVDVATGETRIRRMLAVCAAGRILNPITARSQVIGAMTMGVGGALSEELVVDKERGF 650
           +E+A+D  TG   + R++A    G+++NP   R+Q+ G +       L E +  D+ R  
Sbjct: 613 LEIAIDADTGRLLVTRVVAAVDTGQVVNPDGVRNQIEGGIVQATSWTLFEGVRFDRRR-- 670

Query: 651 FVNHDLAAYEVPVHADIPHQEVVFLDETDPMSSPMKAKGIAELGICGVAAAVANAIYNAT 710
             + D  AY +   + +P    V +     +  P    G A  G  G  AA+ NAI +A 
Sbjct: 671 ITSVDWTAYPILRFSRMPRAVEVHIIPRPGL--PFLGAGEAAQGPMG--AALGNAIRDAC 726

Query: 711 AIRVREYPITLDKL 724
             R+   P+   ++
Sbjct: 727 GQRLATLPLDASRI 740



 Score = 33.9 bits (76), Expect = 3e-05
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 5/97 (5%)

Query: 448 ARVRLDREGIVTVETDMTDIGTGSYTIIAQTAAEMLGVPIEKVAVSLGDSRFPVSSG-SG 506
           A +R+  +G  T+ T   ++G G  T + Q AAE L +P  ++ +   D+    + G + 
Sbjct: 59  AWIRIAPDGTATIFTGKAELGQGIRTALLQVAAEELKLPFSRLDLITADTSRTSNEGYTA 118

Query: 507 GQFGGNCSTAGVYAACAKLREAV----AQKLGFNSAD 539
                  S   +  A A++RE +    A++ G   AD
Sbjct: 119 ASHSVQDSGTAIRNAAAQVREILIGEAARRAGVARAD 155