Pairwise Alignments

Query, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

Subject, 909 a.a., Sensor protein KdpD from Methylophilus sp. DMC18

 Score =  558 bits (1438), Expect = e-163
 Identities = 336/907 (37%), Positives = 515/907 (56%), Gaps = 47/907 (5%)

Query: 11  RPDPDALLALAE----QGRRGKLTVFLGAAPGVGKTFAMLTRARRLKEEGGDIVIGLVET 66
           RP+PD LL   +    +  RGKL VF G++ GVGKT AML  A  L+ E   +++G++ET
Sbjct: 7   RPNPDQLLKQLDLENRKSLRGKLKVFFGSSAGVGKTCAMLNAAHALQREHVHVLVGVIET 66

Query: 67  HGRGETAALLEGLEVLPRRQVLHNGRTLHEFDLDAALARRPRVILVDELAHTNFGESRHP 126
           HGR ETA  +EGL  LP +++ +  +TL EFD+D AL   P VILVDELAH+N   SRH 
Sbjct: 67  HGRSETALRVEGLRCLPLKEIPYRNKTLKEFDIDEALRIHPTVILVDELAHSNVEGSRHK 126

Query: 127 KRYQDIEELVDAGIDVWTALNIQHLESLSDVVAHIAGVPVRERVPDTVLNRADDVLLVDL 186
           KR+QD+EEL+ +GIDV+T +N+QH+ESL+D+VA I GV V+E +PD+V + AD+V+L+DL
Sbjct: 127 KRWQDVEELLSSGIDVYTTVNVQHIESLNDIVAQITGVKVQETIPDSVFDLADEVVLIDL 186

Query: 187 PPAELIERLKEGKVYLPDNAKRAADRFFRLGNLTALRELALRRTADRVDDQMVDYLRQNA 246
           PP EL++RL EG++Y+P+ A++A   FFR GNL ALRELALRRTADRVD QM +Y +  +
Sbjct: 187 PPEELLQRLDEGRIYIPEQAQKALKNFFRKGNLIALRELALRRTADRVDAQMQEYRQDQS 246

Query: 247 IEGPWGAAERLLVCIGPDPLSEKVVRTASRLASSLNADWMVVSVERAEAE--SSGAMRQL 304
           I+  W A ER+LV IGP+  SE ++RTA+RLA SL ADW+V  +E    +  S  A +++
Sbjct: 247 IQHIWQANERILVGIGPNKESESLIRTAARLAQSLKADWLVAYIETPALQNISIAARKEI 306

Query: 305 DETFRLAEQLGAETRRIIGNDFVEEILKLARREHATQIVIGTRRHYFPLRLFRRSLPDAL 364
            E  RLA+ LGA T  + G+   +++L+ A   + ++IVIG        R F+ S+ DAL
Sbjct: 307 TELLRLAQSLGATTANLSGDSVTDKLLEYALSHNVSRIVIGKPTRSILSRFFQPSVSDAL 366

Query: 365 AARAAGIAIHLVTDGSAPAVKPAARRRSTLP----------DGWGRGVAIATGTAAAATA 414
           A  A  I +H+V  G   + K    + S L            G+   V I+  T+  A+ 
Sbjct: 367 AKAATDIDVHIVMKGRERSSKHKRSKLSALSMSAHFNNQKRQGYVWAVVISAITSLVASV 426

Query: 415 LGLLIEQFVVLQNISLLFLLAVLVSATYAGYVAAIAAALISILAYNFCFIEPVGTFTVAE 474
           L L  E    L NI +L+LL V++ +   G    IAA+ +S+  ++F F+ P  +FTV++
Sbjct: 427 LLLYFE----LANIIMLYLLGVMLISIRYGRGPGIAASFLSVSIFDFFFVPPRFSFTVSD 482

Query: 475 PHEVFALFVFLAAAMLAGGLASRVREQAKTARRRAAATQALYDFSRKLSGTANAEDVLWA 534
              +    + L+ A++   L S +R+QA  A  R   + ALY+  ++L+       ++  
Sbjct: 483 TQYLLTFAIMLSVALVISNLTSSLRKQAMIANYREKRSLALYEVGKELASAMTTSHIVEV 542

Query: 535 AVTQIHATLRRNAALLLP------------EDGDVRLMAAWPPDTELGLTDTMAGRWAFE 582
           ++  +        A+L P            E  D+ L+    P+ +LG+      +W ++
Sbjct: 543 SIHHVARMFNSKVAILTPDSNEQLQIAQVTESNDISLLETKLPEVDLGI-----AQWTYD 597

Query: 583 KKEAAGNGTGTLPNSPFQFRPLMSPHGVVGVFGFLQE-DKPLEINEERALA-AILDQTAI 640
           +++ AG GT TLP+S   + PL +P    GV     E ++ + + E R L      Q  +
Sbjct: 598 RQQQAGLGTDTLPSSKILYIPLKAPMRTRGVLAISPESNQDIYLPEHRQLLDTFASQIGL 657

Query: 641 AVDRARLSRESLDQAAQLEGEKFLAALLSSISHDLRTPLATITGAVTSLRQLGERMSEES 700
           A++R      + D    +E E+   +LLS+ISHDLRTPL +I      L++  +  + E 
Sbjct: 658 ALERKHYVEIARDAVISMETERLRNSLLSAISHDLRTPLTSIIATTGQLKESIDVTTNEY 717

Query: 701 RDDLLKSIEEESGRLTRFVANLLDMTRIEAGTVNAKRDWVDVADVVHSAVERARKYFPGR 760
           +  L+  + ++  R+   V NLLDM R+++GTV    DW  + ++V SA+   +    G 
Sbjct: 718 K--LIAGLHDQGIRMQNLVLNLLDMARLQSGTVKLNSDWHVLEEIVGSAINGLQTTLQGH 775

Query: 761 VFETSIAPDLPLIRGDSVLLGQVIFNLLDNANRFG--GDEPVSIYGRREEDEIVLSVTDL 818
                    +PL+  D++L+ +V+ NLLDNA ++   G E V I  ++ +  I +S TD 
Sbjct: 776 RVTVKPMEHIPLLFVDAILIERVLSNLLDNACKYSELGTE-VIIAAQQNKQHIHVSFTDE 834

Query: 819 GKGIAPADLDRVFDKFFRKGKPDGRSLGTGLGLSISKGFVEAMDGRIKAESPAMKRRGTR 878
           G+G+       +F KF R G+ +    G GLGLSI K  ++A  G+I AE     ++GT 
Sbjct: 835 GQGLPDGMEASIFQKFTR-GRSESSIPGIGLGLSICKAIIDAHGGKIWAEK--NPKKGTT 891

Query: 879 ISMRFPV 885
                PV
Sbjct: 892 FIFTLPV 898