Pairwise Alignments

Query, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

Subject, 895 a.a., sensor histidine kinase KdpD from Magnetospirillum magneticum AMB-1

 Score =  716 bits (1848), Expect = 0.0
 Identities = 402/881 (45%), Positives = 548/881 (62%), Gaps = 8/881 (0%)

Query: 11  RPDPDALLALAEQGRRGKLTVFLGAAPGVGKTFAMLTRARRLKEEGGDIVIGLVETHGRG 70
           RP PDALLA A +  RG+L +FLGAAPGVGKT+AML  A    ++G D+V G+VETHGR 
Sbjct: 6   RPSPDALLAQARREGRGRLKIFLGAAPGVGKTYAMLCAAHERLKDGVDVVAGVVETHGRK 65

Query: 71  ETAALLEGLEVLPRRQVLHNGRTLHEFDLDAALARRPRVILVDELAHTNFGESRHPKRYQ 130
           ET AL++GL+VLP R V + GR   E DLDA ++RRP + LVDELAH N   SRH KR+Q
Sbjct: 66  ETEALVKGLDVLPARLVEYRGREFREMDLDALISRRPAIALVDELAHANVPGSRHLKRWQ 125

Query: 131 DIEELVDAGIDVWTALNIQHLESLSDVVAHIAGVPVRERVPDTVLNRADDVLLVDLPPAE 190
           D+EE++ AGI+V+  LNIQHLESL+DVV  I+GV VRE +PD VL  AD++ L+DLPPA+
Sbjct: 126 DVEEVLAAGINVYATLNIQHLESLNDVVERISGVKVRETLPDGVLAGADEIELIDLPPAD 185

Query: 191 LIERLKEGKVYLPDNAKRAADRFFRLGNLTALRELALRRTADRVDDQMVDYLRQNAIEGP 250
           LI+RL EGKVY+P+ A+RA   FF  GNLTALRE+ALR  A+RVD QMVDY+R NAI GP
Sbjct: 186 LIKRLNEGKVYVPEQARRAVGHFFSPGNLTALREMALRHAAERVDAQMVDYMRSNAIAGP 245

Query: 251 WGAAERLLVCIGPDPLSEKVVRTASRLASSLNADWMVVSVERAEAES--SGAMRQLDETF 308
           W A ER++VCI     S+++VR A R A    A W+ V+VE +   +       ++    
Sbjct: 246 WPARERIMVCIDERADSDRLVRVAKRAADRRGAAWVAVTVETSHTLTLPEADKDRVAAAM 305

Query: 309 RLAEQLGAETRRIIGNDFVEEILKLARREHATQIVIGTRRHYFPLRLFRRSLPDALAARA 368
           RLA QLG ET  + G+D V  +L  A   +ATQIV+G  R    L  F  ++ D L  R 
Sbjct: 306 RLAAQLGGETAHLQGDDVVAVVLACAAERNATQIVVGRPRRLRLLDHFAATVTDRLVERG 365

Query: 369 AGIAIHLVTDGSAPAVK-PAARRRSTLPDGWGRGVAIATGTAAAATALGLLIEQFVVLQN 427
               + +V D S  A K P        P  W  G+A+A   A AAT LG  I+ ++ + +
Sbjct: 366 GAFNVLVVGDDSEDARKVPKPTAVQPEPQDW-PGLALALAAAGAATGLGFAIDLWLSVAS 424

Query: 428 ISLLFLLAVLVSATYAGYVAAIAAALISILAYNFCFIEPVGTFTVAEPHEVFALFVFLAA 487
           IS+ +LLAV+V A + G    I A++ S LA+NF F EP  TF V++   +  L  FL A
Sbjct: 425 ISVAYLLAVMVVAMWIGLRPGILASVASFLAFNFFFTEPRFTFAVSDVQNLLTLAFFLIA 484

Query: 488 AMLAGGLASRVREQAKTARRRAAATQALYDFSRKLSGTANAEDVLWAAVTQIHATLRRNA 547
           A +  G+ASR+R Q + +R  A  T  LY+F RK++G A  +DVLWA V  +  T+R  +
Sbjct: 485 AFIVSGMASRLRAQVQASRESARRTVNLYEFGRKVTGAATQDDVLWAVVHHVADTIRGRS 544

Query: 548 ALLLPEDGDVRLMAAWPPDTELGLTDTMAGRWAFEKKEAAGNGTGTLPNSPFQFRPLMSP 607
            +L+P +G + +MA +PP+  L      A  WA+   + AG G+ TLP + + F PL + 
Sbjct: 545 LVLMPVEGRLSVMAGYPPEDHLDDKSAAAAEWAWSHGKPAGRGSATLPAALWLFLPLRTG 604

Query: 608 HGVVGVFGF-LQEDKPLEINEE-RALAAILDQTAIAVDRARLSRESLDQAAQLEGEKFLA 665
              VGV G  + ED  L    + R L  + DQ A+A++R  L  +        E E+  +
Sbjct: 605 RSAVGVLGVQMSEDADLPSPAQMRLLETLADQAAVAIERTTLVSDIEAARVATERERLRS 664

Query: 666 ALLSSISHDLRTPLATITGAVTSLRQLGERMSEESRDDLLKSIEEESGRLTRFVANLLDM 725
           ALLSS+SHDLRTPL +I GA +SL    + +    R DL +++++E+ RL RFV NLLDM
Sbjct: 665 ALLSSLSHDLRTPLVSIMGAASSLISYDDILGPADRRDLAQTVQDEAERLNRFVQNLLDM 724

Query: 726 TRIEAGTVNAKRDWVDVADVVHSAVERARKYFPGRVFETSIAPDLPLIRGDSVLLGQVIF 785
           TR+ +GT+  + DW D++D+V  AVERA +       +  I PD+PL+  D+VLLGQV F
Sbjct: 725 TRLGSGTLKPRIDWADLSDIVGGAVERAARLTRSHAVKVDIDPDMPLLCVDAVLLGQVFF 784

Query: 786 NLLDNANRFG-GDEPVSIYGRREEDEIVLSVTDLGKGIAPADLDRVFDKFFRKGKPDGRS 844
           NLLDNA ++      + ++ RR  D I + V D G GI  AD ++VFD F+R G  D + 
Sbjct: 785 NLLDNACKYSPPGTGIKVWARRAADHISIEVADQGPGIPEADREKVFDMFYRVGLTDSQP 844

Query: 845 LGTGLGLSISKGFVEAMDGRIKAESPAMKRRGTRISMRFPV 885
            GTGLGL+I +G VEA  G I+AE+  +   GT I +R P+
Sbjct: 845 AGTGLGLAICRGIVEAHGGTIRAEA-GLHGSGTAIIIRLPL 884