Pairwise Alignments

Query, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

Subject, 525 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  116 bits (290), Expect = 4e-30
 Identities = 84/234 (35%), Positives = 118/234 (50%), Gaps = 20/234 (8%)

Query: 655 AAQLEGEKFLAALLSSISHDLRTPLATITGAVTSLRQLGERMSEESRDDLLKSIEEESGR 714
           A Q     ++    + +SH+ +TPLATITG V  LR+    M+ E R+  L ++E E+ R
Sbjct: 306 ATQERRADYIRDFAAHVSHEFKTPLATITGTVELLREHLTDMTPEDRERFLDNLESEASR 365

Query: 715 LTRFVANLLDMTRIE---AGTVNAKRDWVDVADVVHSAVERARKYFPGRVFETSIAPDLP 771
           L+R V  LLD+ R +   AG     R    +A +   A         G   E     D+ 
Sbjct: 366 LSRLVQRLLDLARADVMPAGQDGCCRPLAVIAGLAERA---------GLTIEIMADGDM- 415

Query: 772 LIRGDSVLLGQVIFNLLDNANRFGG-DEPVSIYGRREEDEIVLSVTDLGKGIAPADLDRV 830
           ++R  +  +  V  NLLDNA R GG    V++  RR++DE+VL + D G GI+PA+  RV
Sbjct: 416 MVRMGAEAMETVFGNLLDNACRHGGPGSRVTLALRRDDDEVVLILADDGPGISPANAGRV 475

Query: 831 FDKFFRKGKPDGRSLGTGLGLSISKGFVEAMDGRIKAESPAMKRRGTRISMRFP 884
           F  FF   + +G   GTGLGLSI +  V A  G I         RG R  +R P
Sbjct: 476 FTPFFTTARKEG---GTGLGLSIVRSLVTAHGGAIALRP---SERGARFEIRLP 523