Pairwise Alignments

Query, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

Subject, 890 a.a., two-component system sensor histidine kinase KdpD from Erwinia tracheiphila SCR3

 Score =  531 bits (1369), Expect = e-155
 Identities = 345/908 (37%), Positives = 504/908 (55%), Gaps = 55/908 (6%)

Query: 7   DLKSRPDPDALLALAEQGRRGKLTVFLGAAPGVGKTFAMLTRARRLKEEGGDIVIGLVET 66
           D   RPDPDALL  A++  RGKL ++ GA  GVGKT+AML  ARRL+ +G ++++G+VET
Sbjct: 3   DELQRPDPDALLQQADESGRGKLKIYFGACAGVGKTWAMLQEARRLRAQGLEVLVGVVET 62

Query: 67  HGRGETAALLEGLEVLPRRQVLHNGRTLH-EFDLDAALARRPRVILVDELAHTNFGESRH 125
           HGR ETAALLEGL VLPRR     G+  H EFDLDAALAR P VIL+DELAH+N   SRH
Sbjct: 63  HGREETAALLEGLTVLPRRAT---GQHCHPEFDLDAALARNPAVILMDELAHSNAPGSRH 119

Query: 126 PKRYQDIEELVDAGIDVWTALNIQHLESLSDVVAHIAGVPVRERVPDTVLNRADDVLLVD 185
           PKR+QDI+EL+DAGI+V T +N+QHLESL+DVV  + G+ VRE VPD   + AD+V+LVD
Sbjct: 120 PKRWQDIQELLDAGINVMTTVNVQHLESLNDVVGGVTGIRVRETVPDPFFDAADEVVLVD 179

Query: 186 LPPAELIERLKEGKVYLPDNAKRAADRFFRLGNLTALRELALRRTADRVDDQMVDYLRQN 245
           LP  +L +RLKEGKVY+ D A+RA + FFR GNL ALRELALRRTADRVDDQM  +    
Sbjct: 180 LPADDLRQRLKEGKVYIGDRAERAIENFFRKGNLFALRELALRRTADRVDDQMRAWRDSQ 239

Query: 246 AIEGPWGAAERLLVCIGPDPLSEKVVRTASRLASSLNADWMVVSVE--RAEAESSGAMRQ 303
             E  W   + +L+CIG +  SEK+VRTA+RLA+ L++ W  V VE  R    S    R 
Sbjct: 240 GREKVWHTRDAILLCIGDNRGSEKLVRTAARLAARLDSVWHAVYVETPRLHRLSEARRRG 299

Query: 304 LDETFRLAEQLGAETRRIIGNDFVEEILKLARREHATQIVIGTRRHYFPLRLFRRSLPDA 363
           +  T ++A+ LGAET  +      + +L+ AR  +  +I+IG R    P+R ++    D 
Sbjct: 300 ILRTLQMAQDLGAETATLSDPHEADAVLRYAREHNLGKIIIGRR----PVRRWKH---DG 352

Query: 364 LAARAAGIA-----IHLVTDGSAPAVKPAARRRSTLPDGWG---RGVAIATGTAAAATAL 415
            A R   +      + +  D   PA    A       + W    +G A A    A  T  
Sbjct: 353 FARRLGQLGPDLDLVIVALDEPLPASASTASVSRLPGEKWRPQLKGGAAALLLCALVTLA 412

Query: 416 GLLIEQFVVLQNISLLFLLAVLVSATYAGYVAAIAAALISILAYNFCFIEPVGTFTVAEP 475
           G  +   V   N+ +++LLAV+V A   G   ++ A +++I+A++  F+ P GT  V++ 
Sbjct: 413 GRWLLPGVDSVNLVMVYLLAVVVVALCYGRWPSVVATVLNIVAFDLFFVTPTGTIAVSDV 472

Query: 476 HEVFALFVFLAAAMLAGGLASRVREQAKTARRRAAATQALYDFSRKLSGTANAEDVLWAA 535
             +    V LA  ++ G L + VR QA+ AR R    + LY+ ++ LS   + +D+    
Sbjct: 473 QYLVTFGVMLAVGVIVGNLTAGVRYQARVARYREQRVRHLYEMAKTLSRALSQQDIAQTL 532

Query: 536 VTQIHATLRRNAALLLPED-------GDVRLMAAWPPDTELGLTDTMAGRWAFEKKEAAG 588
              + ATL+  + LLLP+        G+ RL A         + D    RW+F+K + AG
Sbjct: 533 PRSLDATLQARSELLLPDSEGELITVGESRLSA---------VPDRAIARWSFDKGQPAG 583

Query: 589 NGTGTLPNSPFQFRPLMSPHGVVGVFGFLQEDKPLEI------NEERALAAILDQTAIAV 642
            GT TLP  P+Q  PL +    +G+       +PL +       ++R +       A A+
Sbjct: 584 AGTDTLPGVPWQILPLKAGSETLGLLVL----EPLNLRQLMIPEQQRLVETFTVLIANAL 639

Query: 643 DRARLSRESLDQAAQLEGEKFLAALLSSISHDLRTPLATITGAVTSLRQLGERMSEES-R 701
           +R  LS+         E E+   ALLS++SHDLRTPL  + G    L    +  SE S  
Sbjct: 640 ERIGLSQREAVSRLAAEREQLRNALLSALSHDLRTPLTVLFGQAEILTL--DLASEGSVH 697

Query: 702 DDLLKSIEEESGRLTRFVANLLDMTRIEAGTVNAKRDWVDVADVVHSAVERARKYFPGRV 761
                ++ E++    R V NLLDM R+++G  + + +W+ + ++V S ++        R 
Sbjct: 698 APQASAMREQTLNTVRLVNNLLDMARLQSGGFSLRAEWMALDELVGSTLKMMAPSLKARS 757

Query: 762 FETSIAPDLPLIRGDSVLLGQVIFNLLDNANRFGGDEPVSIYGRR--EEDEIVLSVTDLG 819
               +  ++ LI  D  L+ +V+ NL++NA ++ G +       R      + ++V D G
Sbjct: 758 VVMDLPAEMLLIHVDGPLMERVLTNLVENALKYAGPQATIGISARVVSRQWLTIAVWDDG 817

Query: 820 KGIAPADLDRVFDKFFRKGKPDGRSLGTGLGLSISKGFVEAMDGRIKAESPAMKRRGTRI 879
            GIA    +++F+KF R G  +    G GLGL+I +  ++  +GRI AE+      G R 
Sbjct: 818 PGIADGQTEQIFEKFSR-GSKESAVPGVGLGLAICQAIIDIHEGRIHAEN--RPEGGARF 874

Query: 880 SMRFPVAE 887
            +  P+ E
Sbjct: 875 VITLPMKE 882