Pairwise Alignments

Query, 896 a.a., sensor protein from Sinorhizobium meliloti 1021

Subject, 1274 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score = 99.4 bits (246), Expect = 1e-24
 Identities = 108/385 (28%), Positives = 163/385 (42%), Gaps = 43/385 (11%)

Query: 543 LRRNAALLLPEDGDVRLMAAWPPDTELGLTDTMAGRWAFEKKEAAGNGT----------G 592
           L+R A+  LP  GD+          E  L D     W F +  A G             G
Sbjct: 214 LQRVASEGLPPGGDLA--------PERTLPDCNPTPWPFAEALATGAPVTVEGLTLRCPG 265

Query: 593 TLPNSPFQFR-------PLMS-----PHG--VVGVFGFLQEDKPLEINEERALAAILDQT 638
            LP +P+          P++S     PHG  V G+    + D P     ERA   I    
Sbjct: 266 RLPGTPWPEAVEQALVVPILSARADAPHGFLVTGISPRRRIDAPYVTLFERAAGHI---- 321

Query: 639 AIAVDRARLSRESLDQAAQL-EGEKFLAALLSSISHDLRTPLATITGAVTSLRQLG---E 694
           A A+  A    E   +A  L E ++   A  S+ SH+ RTPL  + G V  + Q     +
Sbjct: 322 ATAITNAEAYEEERRRAEMLAELDRAKTAFFSNASHEFRTPLTLMLGPVEDMLQRSPAED 381

Query: 695 RMSEESRDDLLKSIEEESGRLTRFVANLLDMTRIEAGTVNAKRDWVDVADVVHSAVERAR 754
           R +     D L+ +     RL R V  LLD++RIEAG + A+ + VD+A          R
Sbjct: 382 RAAVPVERDALELVHRNGQRLLRLVNALLDVSRIEAGRMKARFEPVDLAAFTAELASSFR 441

Query: 755 KYFPGRVFETSI-APDLPL-IRGDSVLLGQVIFNLLDNANRFGGDEPVSIYGRREEDEIV 812
                   +  I  P LP  +  D  L  +++ NL+ NA ++     V++  +   +  V
Sbjct: 442 SAMDRAGLDYRIDCPPLPEPVWIDRDLWEKIVLNLISNAFKYTLSGGVAVAVQPVGERAV 501

Query: 813 LSVTDLGKGIAPADLDRVFDKFFRKGKPDGRS-LGTGLGLSISKGFVEAMDGRIKAESPA 871
           L+V D G GI   +  RVFD+F R     GR+  GTG+GL++ K   +   G +  +S  
Sbjct: 502 LTVRDTGVGIPAEEQPRVFDRFHRIEGQSGRTHEGTGIGLALVKDLTQLHGGTVALDSDV 561

Query: 872 MKRRGTRISMRFPVAETGITEKERG 896
            +     +++ F  A    TE+  G
Sbjct: 562 GRGSTFTVTLPFGNAHVPATERPAG 586



 Score = 48.9 bits (115), Expect = 2e-09
 Identities = 68/268 (25%), Positives = 111/268 (41%), Gaps = 34/268 (12%)

Query: 643  DRARLSRESLDQAAQLEGEKFLAALLSSISHDLRTPLATITGAVTSL-RQLGERMSEESR 701
            +RA   R++ +Q  Q +  + +  L   ++HD    L  ++  +  + R++G     E  
Sbjct: 891  ERAATLRKTEEQLRQSQKMEAVGQLTGGMAHDFNNLLQAMSSCLQLVSRRVGHAPEVEPI 950

Query: 702  DDLLKSIEEESGRLTRFVANLLDMTRIEAGTVNAKRDWVDVADVVHSA---VERARKYFP 758
             D  +   +    L R    L+  +R ++    A     DV D +      ++RA +   
Sbjct: 951  LDAGRQAVDRGASLIR---QLMAFSRRQSLQPEA----FDVRDRLLGLRLFLDRALRADI 1003

Query: 759  GRVFETSIAPDLPLIRGDSVLLGQVIFNLLDNANRFGGDEPVSIYGRREEDEIVLS---- 814
            G   E ++   L  +  D V     + NL  NA      +   + G    D +VL     
Sbjct: 1004 G--LEFALQGGLWPVMADPVQFDLAVLNLATNARDAIDADGAVVVGA---DNVVLDGMDG 1058

Query: 815  ---------VTDLGKGIAPADLDRVFDKFFRKGKPDGRSLGTGLGLSISKGFVEAMDGRI 865
                     V D G+GIAP  L RVF+ FF   K  G+  GTGLGL+   GF     G  
Sbjct: 1059 LSGEFLKVFVRDSGRGIAPDALGRVFEPFFTT-KAVGK--GTGLGLAQVYGFCRQSGGTA 1115

Query: 866  KAESPAMKRRGTRISMRFPVAETGITEK 893
              ES  ++ +GT +S+  P AE  +  +
Sbjct: 1116 TVES--VEGKGTVVSLLLPRAEATVASE 1141