Pairwise Alignments

Query, 273 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 288 a.a., ABC transporter for L-Fucose, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  142 bits (358), Expect = 8e-39
 Identities = 85/266 (31%), Positives = 138/266 (51%), Gaps = 7/266 (2%)

Query: 13  AILIIWLAPLFAVILTSFRSMADVMSGNLWGWPTEIAVVENYTAVFTQTPMAG-----YF 67
           A+L+I L  L+ ++L+S R   ++M+     W  E   ++ Y A+F+     G     YF
Sbjct: 25  AMLVICLPGLW-IVLSSLRPTVEIMAKPPV-WIPETLSLDAYRAMFSGAGQGGVPVWDYF 82

Query: 68  LNSLVITIPSVIGVLSLSTLAGFVLARYRFPGNMVIFALFVGGNFLPHQIMMIPVRDLMV 127
            NSL++++ S +  L++    G+  ARYRF     IF  F+    +P   + +P+  L  
Sbjct: 83  RNSLIVSVTSTVIALAIGLSGGYAFARYRFKAKSAIFLGFMLTRAVPGIALSLPLFMLYA 142

Query: 128 RLNLYDTTTALIIFHVAFQTGFATLFMRNFIAALPDELFQAARAEGATPFQTLIHVVVPL 187
           R  + DT  +LI+ +VA    F    +  F   +P +L +AA+ +G TP+Q    V  PL
Sbjct: 143 RTGIIDTHFSLILTYVALNVPFTIWLIDGFFRQVPKDLAEAAQIDGCTPWQAFWQVEFPL 202

Query: 188 VRPAWAALAILLFTFIWNDYFWAVVLTVSDNVKPVTAGLANLRGEWVSAWNLISAGTIIV 247
             P  A+  I  F   WN+Y  A  +T S N K +  GL +   E+   W  + A  +++
Sbjct: 203 AGPGIASAGIFAFLTSWNEYALASQITRSVNSKTLPVGLLDYTAEFTIDWRGMCALAVVM 262

Query: 248 AVPPVVMFFLMQKHFIAGLTMGAVKG 273
            VP + + F++QKH ++GLT GAVKG
Sbjct: 263 IVPALTLTFIIQKHLVSGLTFGAVKG 288