Pairwise Alignments

Query, 422 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 419 a.a., N-Acetyl-D-glucosamine ABC transport system, periplasmic substrate-binding component (from data) from Sinorhizobium meliloti 1021

 Score = 84.3 bits (207), Expect = 6e-21
 Identities = 100/349 (28%), Positives = 152/349 (43%), Gaps = 39/349 (11%)

Query: 13  RTFLKGTAGVSTALSGFPIPALAQSSEVTIISAESNANTAEVLRRIAADFGKAAGTKVVV 72
           RT +KG    S+ L    + A AQ + +TI S  ++       + I A   K  G KVV 
Sbjct: 3   RTTMKGLLLASSILGSAGL-AQAQDATLTIESWRNDDLAIWQEKLIPAFEAKNPGIKVVF 61

Query: 73  NNMDHEAHKTAIRNYLVAGAPDVCFWFSGNRMRAFVTRGLFDDISDLFEKEKYADVLG-- 130
                  +  A+   L AG+       +G+     +T   FD   +L+ K+  AD+ G  
Sbjct: 62  APSAPTEYNAALNAKLDAGS-------AGD----LITCRPFDASLELYNKKHLADLTGLS 110

Query: 131 --------ATAGSVTVEGKQ-YGLPTGGTLWGMFYRKDVFDEHGLKVPTSWDDLLAFGEK 181
                   A +   T +GK  + +P    + G  Y KD FD+ GL VP + ++  A  EK
Sbjct: 111 GMENFSDVAKSAWTTDDGKATFCVPMASVIHGFIYNKDAFDQLGLSVPATEEEFFAVLEK 170

Query: 182 CKS-ASLTPVAMGTKDLWPAAGWFDQMNLRIN---GLDKHFALMNGEMAYTDET-LKP-- 234
            K+  +  P+AMGTKDLW AA      N+  N   G +   AL+ GE   TDE  ++P  
Sbjct: 171 IKADGNYIPMAMGTKDLWEAA-TMGYQNIGPNYWKGEEGRLALLKGEQKLTDEPWVEPFR 229

Query: 235 VFEHWEELIKQGFFTPDHTSFGWQEAGAFLAQKRAGMMNLGAFVRAAFPRQDLPQLTFAP 294
           V   W++ +  GF      +  + ++       RA +   G++  + F  Q   ++   P
Sbjct: 230 VLAKWKDYLGDGF-----EAQTYPDSQNLFTLGRAAIYPAGSWEISGFNTQAEFKMGAFP 284

Query: 295 FPVIEDGLGRYEEFSLNSVHIPTNAKNK--PGAREFLTHFYKPENLAAY 341
            PV + G   Y     N + I  NAK+K    A+ FLT    PE    Y
Sbjct: 285 PPVKKAGDTCYIS-DHNDIGIGLNAKSKNADAAKTFLTWVASPEFAEIY 332