Pairwise Alignments

Query, 408 a.a., ROK family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 387 a.a., Xylose-responsive transcription regulator, ROK family from Variovorax sp. SCN45

 Score =  121 bits (304), Expect = 3e-32
 Identities = 98/341 (28%), Positives = 149/341 (43%), Gaps = 37/341 (10%)

Query: 20  VRTKGDQSTTRAMNRRLILNLLRREGAKSRAEIAAATGLSPAAVTFVVSDLIEEGLLIE- 78
           V T GDQ   + MNR ++L LLR +   SRA +A  +GL+ + V+ +V +LI+E  L E 
Sbjct: 1   VTTIGDQQLVKRMNRSVLLRLLRAQPGLSRARLAGESGLTKSTVSLLVRELIDEDWLSES 60

Query: 79  GQSVAGAQGRRPIPVAIDYAGGVALGFKLMAGSVECVVTDLETTPLASLRLPLPAHDPDT 138
           G +VA   GR   P+ I+      +G ++   +V  V   L+   L S    L    P  
Sbjct: 61  GAAVADGLGRPSTPLRINVGVRALMGVEIAVETVRLVCMSLQGEVLYSDTQALADSAPAG 120

Query: 139 IAEALAAAAPKLVALANRPAARLAGIGIAMPGVIDNQRAVCIRSNRYGWDNVPLGDLVAS 198
               +A  A    A   +   RL+ IG+ +PG +D+   V   +   GW NV L   +  
Sbjct: 121 ACAQVARMASVAQARLEQLGLRLSSIGVCVPGAVDDCTGVVRFAPNLGWRNVSLLPALEK 180

Query: 199 RIG------VPVWLEDDTNAYAIAQQLF--GLGRHYKTMGVLA-IGVGVACSLVLDGKLY 249
             G      V V L++D +A  + +  F   +G+  +   +     VGV   +VL+ +L+
Sbjct: 181 AFGAVGLPRVTVQLQNDADAAVLGEYEFAASVGQEGEDPLIFVNCDVGVGAGVVLNDRLF 240

Query: 250 RGAHGAAGKFGHFPHMEGGRPCECGKRGCLMSYFSEPAMLQTWHERSGRPETDGRAEMVA 309
            GA G AG+ GH      G  C CG+RGC  ++F    +      R GR           
Sbjct: 241 TGAQGMAGEIGHTILELDGPECSCGRRGCAEAFFGSRVL-----RREGRD---------- 285

Query: 310 AIAAGDKAAHSVMREAGETLGRHLAGLMNVIDPEVIVVGGE 350
                       M+ A    G  L  L    +P  IV+GG+
Sbjct: 286 ------------MQRAAAFFGVMLQNLWVTFNPRAIVLGGK 314