Pairwise Alignments

Query, 443 a.a., penicillin-binding protein from Sinorhizobium meliloti 1021

Subject, 632 a.a., penicillin-binding protein 2 from Pseudomonas simiae WCS417

 Score =  108 bits (270), Expect = 5e-28
 Identities = 117/417 (28%), Positives = 187/417 (44%), Gaps = 75/417 (17%)

Query: 23  ENQRIYPNGSLAAHILGAVDIDNF------GIAGIEKWIDANWLADLRGAGL-ALKGRDL 75
           E + + P      H +G   I+ F      G  G E+ ++ N     RG  L  LK  D 
Sbjct: 187 ELKTLDPVNYSGTHHIGKTGIERFYEPELHGQVGYEE-VETN----ARGRVLRVLKRTDP 241

Query: 76  QP---VELSIDLRVQYAMEQELGKAVKKFGAAAGAGLLLDVTNGEILALASYPAFDPNNP 132
            P   + LS+D+++Q A E  LG          GA + LD   GE+LA+ S P+FDPN  
Sbjct: 242 VPGKDIVLSLDIKLQEAAEMALG-------GRRGAVVALDPKTGEVLAMVSQPSFDPNLF 294

Query: 133 V------------DAFKPDRINRVTAGVFEMGSTFKALTTAMALESGRFDLESVVDASRP 180
           V            D+      NRV  G++  GST K       L++G      V  +SR 
Sbjct: 295 VTGISFKAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDAG-----VVTASSRV 349

Query: 181 LSFGRQRIHDYRGKYRP--------LTVPEAFIHSSNIVMAKMAMTLGPEALRTFLGRFG 232
              G   + +Y  KYR         + +  A + S++     +A  LG + L  ++G+FG
Sbjct: 350 FDPGYYMLPNYDHKYRNWNRTGDGYVDLDTAIMRSNDTYFYDLAHKLGIDRLSAYMGKFG 409

Query: 233 VLSQLATELPESAAPLRPS----------SWSEVTTATVSFGHG-IAVTPLQASMAVAAL 281
           +  +++ ++ E +  L PS          +W    T  +  G G +  TPLQ + A A +
Sbjct: 410 LGQKVSLDMFEESPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALV 469

Query: 282 ANGGRLIRPTFIK----DSPVSERTIAESLL-SANTSEAIRHLLR--LNAAVGSATKADV 334
           AN G   RP   K    + PV +  I + +L  A+    + H ++  ++ A G+A KA V
Sbjct: 470 ANKGIWNRPHLAKTIEGEKPVDDNPIPDIVLRDASDWTKVNHGMQQVMHGARGTARKAAV 529

Query: 335 PG-YVIGGKTGTAEKVV--QG-RYSKV------LNVTSFMGIVPADNPRYLLLTLLD 381
              Y I GK+GTA+ V   QG +Y +        +   F+G  PAD+P+ ++  +++
Sbjct: 530 GAQYRIAGKSGTAQVVAIKQGEKYDRTKVQERHRDHALFVGFAPADDPKIVVAVMVE 586