Pairwise Alignments

Query, 443 a.a., penicillin-binding protein from Sinorhizobium meliloti 1021

Subject, 582 a.a., peptidoglycan DD transpeptidase from Pseudomonas putida KT2440

 Score =  193 bits (490), Expect = 1e-53
 Identities = 143/446 (32%), Positives = 223/446 (50%), Gaps = 33/446 (7%)

Query: 8   QAVIDSGLAAVGFRPENQRIYPNGSLAAHILGAVDIDNFGIAGIEKWIDANWLADLRGAG 67
           Q V+D  +  V    E +R YP G + AH++G  D+D+ G  G+E   +  WLA + G  
Sbjct: 133 QHVLDLKVPGVYGLEEFRRFYPAGDVTAHMVGFTDLDDHGREGVELAYE-EWLAGVPGKR 191

Query: 68  LALKGR------DLQPVE---------LSIDLRVQYAMEQELGKAVKKFGAAAGAGLLLD 112
             +K R      D+Q  +         LSIDLR+QY   +EL  A+ +  A AG+ +++D
Sbjct: 192 QVIKDRRGRLIKDIQVTKNAKAGKTLALSIDLRLQYLATRELRNAIAEQDAKAGSLVIMD 251

Query: 113 VTNGEILALASYPAFDPNNPVDAFKPDRINRVTAGVFEMGSTFKALTTAMALESGRFDLE 172
           V  GE+LA+ + P ++PNN    F     NR    VFE GST K ++ + AL+SGR+   
Sbjct: 252 VKTGEVLAMVNQPTYNPNNRRSMFPAAMRNRAIIDVFEPGSTVKPISMSAALQSGRWKPT 311

Query: 173 SVVDA-SRPLSFGRQRIHDYRGKYRP-LTVPEAFIHSSNIVMAKMAMTLGPEALRTFLGR 230
             V+     L  GR  I D      P L +    I+SSN+ M+K+A  +G EA+   + +
Sbjct: 312 DKVEVYPGSLQIGRYTIKDVSRSEGPILDLTGILINSSNVGMSKIAFDIGGEAIYRVMSQ 371

Query: 231 FGVLSQLATELPESAAPLRPS--SWSEVTTATVSFGHGIAVTPLQASMAVAALANGGRLI 288
            G+        P       P+   W +  TAT+S+G+G++VT LQ   A AALAN G+++
Sbjct: 372 VGLGQYTGLGFPGERVGNLPNHREWRKAETATLSYGYGVSVTALQLVHAYAALANDGKMV 431

Query: 289 RPTFIKDSPVSERTIAESLLSANTSEAIRHLL-RLNAAVGSATKADVPGYVIGGKTGTAE 347
             + IK   V +   A   +    +E ++ +L ++  A     +A VP Y + GK+GTA 
Sbjct: 432 PLSIIK---VDKTPEAVQAIPKEVAETVQGMLQQVIEAPRGVFRAQVPFYHVAGKSGTAR 488

Query: 348 KVVQGR--YSKVLNVTSFMGIVPADNPRYLLLTLLDEPRGLAETYGNRTSGWNAVPLGGA 405
           K   G   Y++    + F G  P  +PRY ++ ++DEPR      G    G  + P+   
Sbjct: 489 KATVGAKGYTENAYRSLFAGFGPMSDPRYAIVVVIDEPR-----KGGYFGGLVSAPVFSN 543

Query: 406 LLHRILPMLLKPV--FPSPSSAEAVP 429
           ++   L ++  P    P P+ A AVP
Sbjct: 544 VMSGTLRLMNVPPDNLPPPAPAPAVP 569