Pairwise Alignments

Query, 443 a.a., penicillin-binding protein from Sinorhizobium meliloti 1021

Subject, 628 a.a., Peptidoglycan D,D-transpeptidase MrdA from Azospirillum sp. SherDot2

 Score =  105 bits (262), Expect = 4e-27
 Identities = 106/408 (25%), Positives = 172/408 (42%), Gaps = 71/408 (17%)

Query: 5   YKQQAVIDSG---LAAVGFRPENQRIYPNGSLAAHILGAVDIDN---------------- 45
           ++Q A +++    L  V       R YP     AHILG V   +                
Sbjct: 137 WEQVATLETNTPDLPGVSIEVGELRYYPQADWTAHILGYVGAVSESELSGNSDPVLSLPG 196

Query: 46  --FGIAGIEKWID-------ANWLADLRGAGLALK------GRDLQPVELSIDLRVQYAM 90
              G AGIEK+ +            ++   G  ++      G+  + V+L+ID+ +Q  +
Sbjct: 197 FRIGKAGIEKFHEKVLRGTAGTSQLEVNAVGRVIRELSRDEGQSGREVQLTIDMALQRFV 256

Query: 91  EQELGKAVKKFGAAAGAGLLLDVTNGEILALASYPAFDPNNPVDAFKPDRI--------- 141
           ++ L + V      + + +++DV  G I AL S+P++DPN        +           
Sbjct: 257 QERLSQEV------SASAVVMDVHTGGIYALCSHPSYDPNQFTMGISAELWEELLSNQAT 310

Query: 142 ---NRVTAGVFEMGSTFKALTTAMALESGRFDLESVVDASRPLSFGRQRIHDY-RGKYRP 197
              N+   G +  GSTFK +    ALESG       V     L  G  R H + RG +  
Sbjct: 311 PLNNKAVVGQYPPGSTFKMMAALAALESGVVSNRHTVFCPGHLELGDHRFHCWKRGGHGT 370

Query: 198 LTVPEAFIHSSNIVMAKMAMTLGPEALRTFLGRFGVLSQLATELPESAAPLRPS-SWSEV 256
           +    A  HS ++    ++  +G + +     RFG+ S+   +LP   A L PS +W + 
Sbjct: 371 IDFVGALRHSCDVFFYDVSRRIGIDRIAEMSNRFGLGSRTGIDLPHERAGLIPSIAWKKA 430

Query: 257 T---------TATVSFGHG-IAVTPLQASMAVAALANGGRLIRPTFIKD--SPVSERTIA 304
           T         T   S G G +  TPLQ ++    LANGG  ++P   K   +   E+T  
Sbjct: 431 TLGKNWDMGETLVASIGQGYVLTTPLQLAVMTCRLANGGYAVKPHLTKQIKTVSGEQTAW 490

Query: 305 ESL--LSANTSEAIRHLLRL-NAAVGSATKADVP--GYVIGGKTGTAE 347
            S+     N    +R +  + NA  G+A K+ +   GY + GKTG+A+
Sbjct: 491 PSIGVKKENLDIVLRGMTEVTNAPNGTAFKSRITEVGYEMAGKTGSAQ 538