Pairwise Alignments

Query, 728 a.a., MrcA2 penicillin-binding protein from Sinorhizobium meliloti 1021

Subject, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

 Score =  162 bits (409), Expect = 8e-44
 Identities = 87/247 (35%), Positives = 146/247 (59%), Gaps = 12/247 (4%)

Query: 64  ERRLYLPIAAIPERVKAAFLSAEDKSFYSHSGIDVLSVVKAAWSNAVNLSSGQRLIGAST 123
           E R+ + +  +P  +    ++ ED+ FY H G+   S+ +A W   VN S G+   G ST
Sbjct: 166 EDRILIKLDQVPPYLLETLVAVEDRDFYHHWGVSPKSIARAVW---VNTSGGKMTQGGST 222

Query: 124 ITQQLAKNFLLSSDRTLRRKIKEAVLSIRIERSLSKDRILELYLNDIYLG----LGAYGI 179
           +TQQL KNF L+++R+L RK+ EA++++ +E   SK  ILE YLN++++G       +G 
Sbjct: 223 LTQQLVKNFYLTNERSLTRKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGF 282

Query: 180 AAGALTYFEKSVSELTVAEAAYLAALPKGPNNYNPHRHPERAVSRRNWVIGQMQRNGFVS 239
              +  +F + +SEL + + A L  + KGP+ YNP R+PERA+ RRN V+  +++ G  +
Sbjct: 283 GLASQFFFGQPLSELKLHQVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVAT 342

Query: 240 AAQASNMMARPLGVKPQAKNPVMAEANY--FVEEVRREVAGQYGEAALYDGGLSVRTTLD 297
           A Q +     PLGV  + K   +A++++  F++ V+R++   Y +  L + GL + T+ D
Sbjct: 343 AEQVAAAKKMPLGVTTRGK---LADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFD 399

Query: 298 PTLQAAA 304
           P LQ  A
Sbjct: 400 PILQMKA 406



 Score =  119 bits (298), Expect = 6e-31
 Identities = 81/277 (29%), Positives = 129/277 (46%), Gaps = 26/277 (9%)

Query: 435 EVQGAIVSMDPNTGRVLASVGGFSFAQSRFNRATQASRQPGSAFKPFVYAAALD--TGYT 492
           EV+ A+V  +P TG V A +G    + + FNRA  A R  GS  KP VY  AL+  + YT
Sbjct: 425 EVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKPAVYLTALEKPSKYT 484

Query: 493 PATLVMDAPFSMPDGAGRLWKPKNYDGKFGGPSTLRTGLEMSRNLMTVRLARHLGMDLVA 552
             + + D P S+  G G++W P+N+D +  G   L  G+  S N+ T RL   +G+  V 
Sbjct: 485 LTSWLSDDPLSVKGGDGQVWTPQNFDRRSHGTVFLYQGIAHSYNISTSRLGLEVGVPNVL 544

Query: 553 EYGRAFGLYDKLAPYLPMSLGAGETTLTRLVSAYAVLANGGHAVQPSMIDRIQDRHGRTI 612
           +     G+  +   +  + LGAG  T   + + Y  LANGG       I  +    G  +
Sbjct: 545 KTIARLGVTREFPAFPSILLGAGAMTPMEVATMYQTLANGGFNTPMRGIRSVLTAEGEPL 604

Query: 613 FRHDDRACDRCNATRWLHQEEPVLRDTRKQVLDPMTAYQVTSMLRGVVERGTAHRVSQL- 671
            R+  +                      +Q  D  + Y + + ++ V+  GT   V  + 
Sbjct: 605 KRYPFQI---------------------QQRFDAGSIYLIQNAMQRVMREGTGRSVYSVL 643

Query: 672 --GAPVAGKTGTTNDEKDVWFVGYTPTLVTGIFMGYD 706
                +AGKTGT+ND +D WF G+   ++  +++G D
Sbjct: 644 PANLTLAGKTGTSNDSRDSWFAGFGQDVLAVVWLGRD 680