Pairwise Alignments

Query, 728 a.a., MrcA2 penicillin-binding protein from Sinorhizobium meliloti 1021

Subject, 697 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Sphingobium sp. HT1-2

 Score =  179 bits (454), Expect = 4e-49
 Identities = 107/284 (37%), Positives = 153/284 (53%), Gaps = 29/284 (10%)

Query: 436 VQGAIVSMDPNTGRVLASVGGFSFAQSRFNRATQASRQPGSAFKPFVYAAALDTGYTPAT 495
           +QGA+VS+D + G V A VGG  +  S +NRAT A RQPGSA+K FVY AAL+ GYTP T
Sbjct: 324 MQGALVSLDRD-GAVRAMVGGLDYVTSNYNRATTAVRQPGSAWKIFVYMAALEAGYTPDT 382

Query: 496 LVMDAPFSMPDGAGRLWKPKNYDGKFGGPSTLRTGLEMSRNLMTVRLARHLGMDLVAEYG 555
            V D P ++       W P+N +G+F G   +RT    S N +  +L   +G   VA+  
Sbjct: 383 GVTDEPVTING-----WSPRNSNGRFAGAIDIRTAFAYSINTVAAKLGVEVGFPTVADMA 437

Query: 556 RAFGLYDKLAPYLPMSLGAGETTLTRLVSAYAVLANGGHAVQPSMIDRIQDRHGRTIFRH 615
           R FG+   +  +  M LG  +  L  +  A+A +A  G AV P  I ++    GR +++H
Sbjct: 438 RRFGITTPINTHPSMVLGTSDVRLIDMTRAFASIARKGVAVTPYGITKVTTADGRMLYQH 497

Query: 616 DDRACDRCNATRWLHQEEPVLRDTRKQVLDPMTAYQVTSMLRGVVERGTAHRVSQLGAPV 675
            D                    DT + ++ P  A  +T +++  V  GT  R +Q+G PV
Sbjct: 498 QD--------------------DTSRVLVAPWVAAGMTDLMQTAVSTGTG-RAAQIGRPV 536

Query: 676 AGKTGTTNDEKDVWFVGYTPTLVTGIFMGYDAPK--PMGYAKRA 717
           AGKTGTTN  KD WF+G++  + TG+++G D  K  P  Y  RA
Sbjct: 537 AGKTGTTNSGKDGWFLGFSSGITTGVWVGRDDAKAVPSLYGGRA 580



 Score =  172 bits (436), Expect = 5e-47
 Identities = 121/362 (33%), Positives = 183/362 (50%), Gaps = 26/362 (7%)

Query: 14  ALVGIFGIGAVYLWEVANDLPDHRKLAEWEPALMTRFYAYDGTPIAEYARERRLYLPIAA 73
           A  G+  IG V ++     LPD+  L       M R +A DG+ I         +L    
Sbjct: 29  AFAGLVAIG-VAVFIAMQSLPDYNSLKSSPNGQMIRVHAADGSVIVSLGPSFGRWLSYDQ 87

Query: 74  IPERVKAAFLSAEDKSFYSHSGIDVLSVVKAAWSNAVNLSSGQRLIGASTITQQLAKNFL 133
           IP  +  A +S ED+ FY H G+D + + +AAW       SG+R  GASTITQQ+A+N  
Sbjct: 88  IPSVMVDAMVSTEDRRFYMHPGVDPVGMARAAWVALERRGSGRRWQGASTITQQVARNIF 147

Query: 134 LSSDRTLRRKIKEAVLSIRIERSLSKDRILELYLNDIYLGLGAYGIAAGALTYFEKSVSE 193
           L++  +  RK++E VL++ +ER  SK +ILELYLN +Y G GAYGI A +  +F      
Sbjct: 148 LNNSYSWGRKVREMVLAMALERKFSKQQILELYLNKVYFGGGAYGIDAASRKFFGHPAQS 207

Query: 194 LTVAEAAYLAALPKGPNNYNPHRHPERAVSRRNWVIGQMQRNGFVSAAQASNMMARPLGV 253
           L + EAA +A L K P++Y+P    E A+ R   V+  MQ NG +SAA  +N  A   GV
Sbjct: 208 LDLPEAAIIAGLVKAPSSYSPTADAEAAIGRAGVVLDLMQENGKISAADHAN--ANLDGV 265

Query: 254 KPQAKNPVMAEANYFVEEVRREVAGQYGEAALYDGGLSVRTTLDPTLQAAALMALRAGLV 313
           +  A  P      YF +    ++     E    +  L V TT+D  +Q AA  A++A + 
Sbjct: 266 R-MAPEPPQNSVRYFTDWALPQLDTLIDEP---NEPLEVYTTIDLGMQNAATAAVKANV- 320

Query: 314 DYDQARGFRGPVAHIDISG---------DWATALAKHETFTDMKE----WQLAVVLSCSD 360
               + G +G +  +D  G         D+ T+     T T +++    W++ V ++  +
Sbjct: 321 ----SNGMQGALVSLDRDGAVRAMVGGLDYVTSNYNRAT-TAVRQPGSAWKIFVYMAALE 375

Query: 361 AG 362
           AG
Sbjct: 376 AG 377