Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  134 bits (336), Expect = 4e-36
 Identities = 100/308 (32%), Positives = 139/308 (45%), Gaps = 8/308 (2%)

Query: 2   RKLPPLGALRVFEAAARRLSFKDAAEELNVSATAVSHQIRQLEEMLNVKLFERATRQVHL 61
           RK+P   AL  FEAAAR  SF  AA+EL ++  AV  QI  LE  LNV+LF R+ R V L
Sbjct: 3   RKIPSTAALICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGVRL 62

Query: 62  TAAGKTLFPVLREGLDRFEQAIADVHRQQAGQVARLTSTVAFVAKRLAPLAGSFREMYPD 121
           T AG +    +   LD  E+    V RQQ   V  L     F  + L P    F++ +P+
Sbjct: 63  TEAGLSYSRQVAAQLDAVERDTLSVMRQQGANVIELAVVPTFGTQWLLPRLKDFQQRHPE 122

Query: 122 WTLRLDASNRAVDLEADA--DAAIRFGGGNYPGLVTEPLFADRFAPVCAPSLAQTSAADL 179
            T+ L    R   L AD   DAAI FG  ++ G  +  L  +   PVC+P+L        
Sbjct: 123 VTVNLTNRTRPF-LFADTTFDAAIYFGDADWSGTQSHQLMGENPVPVCSPALLNGQG--- 178

Query: 180 RLATLIHFDWGPARRDDPRAPVWRQWLARAGVEDIDASAGISFTDEIHAVQAVVAGQGIG 239
            +    H    P  +   R   WRQW    G+       G  +       QA +   GI 
Sbjct: 179 -MLEARHIAQLPLLQQSTRPYAWRQWFGSVGMNVERDMTGPRYELFSMLAQAAMHDMGIA 237

Query: 240 LLSLTLVAEELASGILVQPFELSLEGDR-YDLVYSPRMADRPATRVLRDWVIAQFGGTVH 298
           L+   L+  EL  G LV     +L  D+ Y L+   R  +  + R  RDW+++Q    ++
Sbjct: 238 LIPPFLIQRELEEGRLVVANRHALSSDKAYYLMIPERKVESASLRAFRDWLVSQAQAYIN 297

Query: 299 QLGPRPAS 306
             G   A+
Sbjct: 298 SSGTNAAN 305