Pairwise Alignments

Query, 340 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 343 a.a., Spermidine/putrescine-binding periplasmic protein from Xanthobacter sp. DMC5

 Score =  107 bits (268), Expect = 3e-28
 Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 14/295 (4%)

Query: 9   GAAISASWAGMAVAEDCALRVTTWGGSYQATY-QAVAQKFEEEHNCRIEWVVGASPDHLI 67
           G A++A  AG A A +  L V+TWGGS++    +A+A KF ++    +E++ G + D L 
Sbjct: 9   GLALAAFVAGPASAAE-KLVVSTWGGSFRDLIAEAIASKFTKDTGVEVEYITGGTIDRLN 67

Query: 68  KARLG----QVDVVTNTLLNSIAGEKEGLWQKLDPAKIPNMANLYPNAVHSPYTVFANVG 123
           KA+L     + D+   T         + L++ LD +K+PN + L P A  SPY + A   
Sbjct: 68  KAKLAKGSPESDITFTTAHVGWLYANDDLFETLDLSKMPNASKLVPQAKVSPYHIGAWAY 127

Query: 124 DYVLAYNKD-TVTTVP-ATWDELWKPEYKNRVVIYGIDHIPTLSLTVLQAEKNGGSIDNV 181
            Y + Y  D T   +  ++W +LW PE K  +     D    ++++ L A   GGS  + 
Sbjct: 128 VYTIGYRPDLTPKNINFSSWADLWNPELKGMLAAPDFDPSHIIAVSALLA---GGSPADW 184

Query: 182 EPGLDRMAELIKSGNLIGSLDVESQMVSLFETGDAWLGMLATGRMKELLSKGVTNVSFVR 241
           + G  ++  L  +     + D  SQ   L  TG+  + ++ +     ++++GV  +  V 
Sbjct: 185 QKGEQKLLALKPNFKAFYTNDANSQ--QLIATGETPVQIMLSMNAYYMIAQGVP-IKLVI 241

Query: 242 PEEGTFPLITSVNIHKDAKNPAMAAAFVNYILSSEVQVAFATRNLYAPTVKNAEI 296
           P+EG    I ++ I K +KN  +A  F+N  L  EVQ   A     +PTV  A++
Sbjct: 242 PKEGGVLGIDTMAIMKGSKNRELAEKFINTALDPEVQGKIAELKKGSPTVLGAKV 296