Pairwise Alignments

Query, 340 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 364 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 81/325 (24%), Positives = 134/325 (41%), Gaps = 46/325 (14%)

Query: 11  AISASWAGMAVAEDCALRVTTWGGSYQATYQAVAQKFEEEHNCRIEWVVGASPDHL---I 67
           ++  + AG A A+D  L V  W         A    FE+E   ++ + V  S + L   +
Sbjct: 12  SLMGAMAGAAQADDKVLHVYNWSDYIAPDTIA---NFEKESGIKVVYDVFDSNETLEAKL 68

Query: 68  KARLGQVDVVT---NTLLNSIAGEKEGLWQKLDPAKIPNMANLY-----------PNAVH 113
            A     D+V    N L   I   K G++Q+LD +K+ N  NL            P+  H
Sbjct: 69  LAGKSGYDIVVPSNNFLAKQI---KAGVYQELDKSKLSNYDNLNKSLLKAVSVSDPDNKH 125

Query: 114 SPYTVFANVGDYVLAYNKDTVTTVPA-----TWDELWKPEYKNRVVIYGIDHI--PTLSL 166
           +   ++ ++G   + YN + V          +WD L KPE   ++   G+  +  PT  L
Sbjct: 126 AFPYMWGSIG---IGYNPEKVKAALGVDKIDSWDVLLKPENIAKLKSCGVSFLDSPTEML 182

Query: 167 TVLQAEKNGGSIDNVEPGLDRMAEL-IKSGNLIGSLDVESQMVSLFETGDAWLGMLATGR 225
            V        +    +  L +  +L +K    IG     S+ +S    G+  + +  +G 
Sbjct: 183 PVALHYLGLPTDTQKKADLKQAEDLFLKIRPSIGYFH-SSKYISDLANGNICVAVGYSGD 241

Query: 226 MKELLSK-----GVTNVSFVRPEEGTFPLITSVNIHKDAKNPAMAAAFVNYILSSEV--- 277
           +++  S+     G   V++  P+EG       V I KDA+N   A  F+NY+L  +V   
Sbjct: 242 IEQAKSRAAEAGGKVKVAYDIPKEGAGSFFDMVAIPKDAENVDAAYKFMNYLLKPQVMAE 301

Query: 278 ---QVAFATRNLYAPTVKNAEIPDD 299
               V F   N  A  + + EI  D
Sbjct: 302 ITNSVHFPNGNEKATALVDKEITSD 326