Pairwise Alignments

Query, 340 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 334 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 55.1 bits (131), Expect = 3e-12
 Identities = 76/336 (22%), Positives = 140/336 (41%), Gaps = 43/336 (12%)

Query: 6   LIAGAAISASWAGMAVAEDCALRVTTWGGSYQATYQAVAQKFEEEHNCRIEWVVGASPDH 65
           L+ GAA  A  A  A+  +C      WG   QA   +   +   ++        G S   
Sbjct: 12  LLCGAASLAQAADTAICYNCPPDWADWGTQLQAIAASTGVQVPLDNKNS-----GQSLAQ 66

Query: 66  LIKARLGQV-DVVTNTLLNSIAGEKEGL--------WQKLDPAKIPNMANLYPNAVHSPY 116
           L+  +   V DVV   +   +  +K  +        W ++ PA + + A  +  A+HS  
Sbjct: 67  LVAEKAAPVADVVYYGVTFGLQAQKAEVVDTYKPKAWDQI-PAGLKDPAGHW-FAIHS-- 122

Query: 117 TVFANVGDYVLAYNKDTV--TTVPATWDELWKPEYKNRVVIYG-----IDHIPTLSLTVL 169
                 G   +  N D +    VP +W +L KPEYK  V         + ++  +++   
Sbjct: 123 ------GTLGIMVNVDALGGLPVPHSWADLLKPEYKGMVGYLDPSSAFVGYVSAVAIN-- 174

Query: 170 QAEKNGGSIDNVEPGLDRMAELIKSGNLIGSLDVESQMVSLFETGDAWLGMLATGRMKEL 229
                GG +DN  P +D   +L K+  ++      ++++S    G+  + +         
Sbjct: 175 --RAMGGDLDNFAPAIDYFQKLAKNTPIVPKQTAYARVLS----GELPILVDYDFNAYRA 228

Query: 230 LSKGVTNVSFVRPEEGTFPLITSVNIHKDAKNPAMAAAFVNYILSSEVQVAFATRNLYAP 289
             K   NV+FV PEEG+  +   +++  +A + A A   ++++LS E Q  +A    Y  
Sbjct: 229 RYKDKANVAFVIPEEGSISVPYVMSLVANAPHRANAQKVLDFVLSDEGQALWA--KAYLR 286

Query: 290 TVKNAEIPDDFEFRDLLVLNDAFGRLYLPDQEKITA 325
            V+  ++P D   +   + +  + R  + D EK+ A
Sbjct: 287 PVRPMKMPADVAAQ--FLPDSDYARAGVVDYEKMAA 320