Pairwise Alignments

Query, 340 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 350 a.a., ABC transporter spermidine/putrescine-binding protein from Variovorax sp. SCN45

 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 82/343 (23%), Positives = 145/343 (42%), Gaps = 20/343 (5%)

Query: 6   LIAGAAISASWAGMAVAEDCALRVTTWGGSYQATY-QAVAQKFEEEHNCRIEWVVGASPD 64
           L+  A ++A  AG A A+   + +   GG+ +  Y Q V   FE+ +  ++  V G S D
Sbjct: 12  LLLAALLAA--AGTAGAQTKTIYIGMNGGTMEKAYTQYVFPAFEKAYGAKVVVVPGTSSD 69

Query: 65  HLIKARLGQVDVVTNTLLNS----IAGEKEGLWQKLDPAKIPNMANLYPNA-VHSPYTVF 119
            L KA+  +     + +       +     GL QK  P++  +++ +YP A         
Sbjct: 70  ILAKAQANKDKPQMHVMFLDDGVMVRAIGMGLCQKQKPSQ--SLSEIYPAARFKDDMASG 127

Query: 120 ANVGDYVLAYN----KDTVTTVPATWDELWKPEYKNRVVIYGIDHIP-TLSLTVLQAEKN 174
            ++G   LAYN    K+     P +W +L  P+YK +VV   +      L   ++     
Sbjct: 128 VSLGMTGLAYNAKMFKEKGWAPPTSWMDLADPKYKGKVVFQSMSSSSFGLHGFLMFNRIQ 187

Query: 175 GGSIDNVEPGLDRMAELIKSGNLIGSLDVESQMVSLFETGDAWLGMLATGRMKELLSKGV 234
           GG+  NVEPG       I   N++  +   +++  + +TG+A +  L    +  L +KG+
Sbjct: 188 GGNDRNVEPGFKAWPTTI-GPNVLEYIPSSAKLSEMVQTGEAAIFPLTPTAVAALKTKGI 246

Query: 235 TNVSFVRPEEGTFPLITSVNIHKDAKNPAMAAAFVNYILSSEVQVAFATRNLYAPTVKNA 294
             V +  P+EG   L+    +  +   P ++     ++LS   Q          PT  N 
Sbjct: 247 P-VEYAPPKEGAVVLMVGQCVIANNSEPELSQKLAEFLLSPVAQANVLQYGAQIPT--NP 303

Query: 295 EIPDDFE-FRDLLVLNDAFGRLYLPDQEKITANKAGWQQQLNQ 336
           + P + E    +  +N         D E I AN+  W  + N+
Sbjct: 304 KTPAEGEGAAQVADINKWMKTAVTIDWESINANRPAWNARWNK 346