Pairwise Alignments

Query, 340 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 365 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 76/335 (22%), Positives = 137/335 (40%), Gaps = 57/335 (17%)

Query: 7   IAGAAISASWAGMAVAEDCALRVTTWGGSYQATYQAVAQKFEEEHNCRIEWVVGASPDHL 66
           +  AA+  + A    AED  L V  W         A   KFE++   ++++ V  S + L
Sbjct: 8   LLAAALMGAMASAVQAEDKVLNVYNWSDYIAPDTIA---KFEKQTGIKVKYDVFDSNETL 64

Query: 67  ---IKARLGQVDVVT---NTLLNSIAGEKEGLWQKLDPAKIPNMANLYPNAVHS------ 114
              + A     D+V    N L   I   K G++++LD +K+PN  NL P+ + +      
Sbjct: 65  EAKLLAGKSGYDIVVPSNNFLAKQI---KAGVYEELDRSKLPNWKNLDPDLLKAVGDASD 121

Query: 115 -------PYTVFANVGDYVLAYNKDTVTTVPA-----TWDELWKPEYKNRVVIYGIDHI- 161
                  PY ++ ++G   + YN + V          +WD ++KPE   ++   G+  + 
Sbjct: 122 KDNKHAFPY-MWGSIG---IGYNPEKVKAALGVDKIDSWDVVFKPENIAKLKSCGVSFLD 177

Query: 162 -PT----LSLTVLQAEKNGGSIDNVEPGLDRMAEL------IKSGNLIGSLDVESQMVSL 210
            PT     +L  L    +    ++++   D   ++        S   IG +   +  V++
Sbjct: 178 APTEMLPAALHYLGKPTDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAV 237

Query: 211 FETGDAWLGMLATGRMKELLSKGVTNVSFVRPEEGTFPLITSVNIHKDAKNPAMAAAFVN 270
             +GD     L   + +   +     V +V P+EG       V I KDA++   A  F+N
Sbjct: 238 GYSGD-----LEQSKARAHEAGDKVKVDYVIPKEGAGTFYDMVAIPKDAEHKDAAYEFMN 292

Query: 271 YILSSEVQ------VAFATRNLYAPTVKNAEIPDD 299
           +++  E+       V F   N  A    + +I  D
Sbjct: 293 FLMQPEIMAEITNAVRFPNGNAAATPFVDKDITSD 327