Pairwise Alignments

Query, 340 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 365 a.a., ABC transporter, substrate binding protein (putrescine) from Agrobacterium fabrum C58

 Score = 71.6 bits (174), Expect = 3e-17
 Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 34/288 (11%)

Query: 17  AGMAVAEDCALRVTTWGGSYQATYQAVAQKFEEEHNCRIEWVVGASPDHL---IKARLGQ 73
           AG A+A++  + V  W          + + F +E   ++ + V    + L   + A    
Sbjct: 19  AGSAMAQEKVVHVYNWSDYIDPV---ILEDFTKETGIKVVYDVYDGNEVLETKLLAGSSG 75

Query: 74  VDVVTNTLLNSIAGEKEGLWQKLDPAKIPNMANLYPN-----AVHSP---YTVFANVGDY 125
            DVV  T        K G++QKLD +K+PN+ N +P+     A + P   Y V    G  
Sbjct: 76  YDVVAPTSPFLARQIKAGVYQKLDKSKLPNLKNAWPDITERLAKYDPGNEYAVNYMWGTT 135

Query: 126 VLAYN----KDTVTTVPA-TWDELWKPEYKNRVVIYGIDHIPTLSLTVLQAEKNGGSIDN 180
            + YN    K  +  VP  +WD L+KPE   ++   GI+ +     T   A    G    
Sbjct: 136 GIGYNVAKVKAALGDVPVDSWDVLFKPENAEKLKSCGINILDASDETFAIAMNYLGK--- 192

Query: 181 VEPGLDRMAELIKSGNLIGSLDV------ESQMVSLFETGDA-----WLGMLATGRMKEL 229
             P     A+L   G +   +         S  ++    GD      W G +   + +  
Sbjct: 193 -NPDSKETADLEAGGEVYSKIRPYVKTFNSSPYINDLANGDTCISIGWSGDILQAKTRAE 251

Query: 230 LSKGVTNVSFVRPEEGTFPLITSVNIHKDAKNPAMAAAFVNYILSSEV 277
            +K    V++V P+EGT+  + S  I  DAKN   A AF+NY++  EV
Sbjct: 252 EAKNGVEVNYVIPKEGTYIWMDSFAIPADAKNVDEAHAFINYMMKPEV 299