Pairwise Alignments

Query, 264 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 271 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

 Score =  119 bits (299), Expect = 5e-32
 Identities = 76/265 (28%), Positives = 134/265 (50%), Gaps = 11/265 (4%)

Query: 1   MTRWDISSIALRLVTFSMMAFLIFPIAVTLIVAVNPREFVLPPNGFTLDWFRAAWSSKTF 60
           +T ++++SI L        AFL  PI + +I + N    V    GF+  W+ +   ++  
Sbjct: 5   LTWFNVTSIVLGF------AFLYIPIILLVIYSFNASRLVTVWAGFSTQWYWSLLENEQL 58

Query: 61  LRGMGVSLVLGLAAALIANALALPAAIALARTN-FPGKGAINLILMTPLLIPTTILSLAL 119
           +    V+L +   ++L+A  L   AA+AL R   F G+   + ++  PL++P  I  L+L
Sbjct: 59  IDAAWVTLRIAFFSSLVATVLGTMAALALTRYGRFGGRTLFSGMIYAPLVMPEVITGLSL 118

Query: 120 YIYFVRVGYGSGLVPLLVGHAIHIMPYAVRILTASLLNFDPSYEEAARNVGAGRIRTLFS 179
            + FV V +  G   +L+ H    M +   ++ + L+ FD + EEAA ++G    +T F 
Sbjct: 119 LLLFVAVNFDRGFWTVLLAHITFTMCFVAVVVQSRLVTFDRTLEEAALDLGCPPFQTFFK 178

Query: 180 VTLPVIRTGLISSLTLCFILSWNDFPISVFLAPPSWTPLPVELYSYIKF----QYDAVAA 235
           +TLP+I   ++S   L F LS +D  I+ F   P  T LP+ +YS ++     + +AV  
Sbjct: 179 ITLPLILPAVVSGFMLAFTLSLDDLVIASFTTGPGATTLPMRIYSQVRLGVTPEINAVCT 238

Query: 236 ALASSLILLSAVAMVVIDRLAGLRR 260
            L + + ++  VA +V  R    R+
Sbjct: 239 ILIAIVTVVVIVASIVTKRAENQRQ 263