Pairwise Alignments

Query, 264 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 264 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

 Score =  172 bits (436), Expect = 6e-48
 Identities = 89/254 (35%), Positives = 152/254 (59%), Gaps = 1/254 (0%)

Query: 8   SIALRLVTFSMMAFLIFPIAVTLIVAVNPREFV-LPPNGFTLDWFRAAWSSKTFLRGMGV 66
           S AL++    M  FL+ P+ V L ++ +  +F+  PP+ +++ W+ A +++   +    +
Sbjct: 7   SPALKIAAGLMFLFLLAPLLVVLPISFSGDDFMAFPPSSWSVKWYGAIFANSVMMNAFWI 66

Query: 67  SLVLGLAAALIANALALPAAIALARTNFPGKGAINLILMTPLLIPTTILSLALYIYFVRV 126
           SL L      ++  + LPAA AL R   PG  A++ +   PLL+PT +L LAL + F  +
Sbjct: 67  SLALAFVVTALSLGIGLPAAYALVRLKPPGAEALSNLFSAPLLLPTIVLGLALLLVFAPM 126

Query: 127 GYGSGLVPLLVGHAIHIMPYAVRILTASLLNFDPSYEEAARNVGAGRIRTLFSVTLPVIR 186
           G       L+  H I  +PYAVR+L+ +L N   + EEAA  +GA  +   F VTLP++R
Sbjct: 127 GLIGSFQGLVAAHLIVTLPYAVRVLSTALANLPLTVEEAAGMLGARPLTVFFRVTLPMMR 186

Query: 187 TGLISSLTLCFILSWNDFPISVFLAPPSWTPLPVELYSYIKFQYDAVAAALASSLILLSA 246
           +GL+S+  LCF++S+++  +S+F+  P    LPV +Y+++  Q D +AAA++  L++L+ 
Sbjct: 187 SGLVSTTALCFLVSFDEVVLSLFMTGPRLQTLPVAMYNHVDQQADPMAAAISVLLVVLTL 246

Query: 247 VAMVVIDRLAGLRR 260
             ++V+DR AGL R
Sbjct: 247 AVVLVVDRTAGLTR 260