Pairwise Alignments

Query, 264 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 264 a.a., ABC-type spermidine/putrescine transport system, permease component II from Variovorax sp. SCN45

 Score =  164 bits (416), Expect = 1e-45
 Identities = 87/246 (35%), Positives = 146/246 (59%), Gaps = 1/246 (0%)

Query: 18  MMAFLIFPIAVTLIVAVNPRE-FVLPPNGFTLDWFRAAWSSKTFLRGMGVSLVLGLAAAL 76
           ++ F++ P+ V  IVA  P     +P   F+L WF A ++   F++    SL L L++A 
Sbjct: 15  VIVFMLAPLVVVCIVAFTPENTLTIPTTRFSLRWFEAVFAHPDFMQSFWNSLWLALSSAT 74

Query: 77  IANALALPAAIALARTNFPGKGAINLILMTPLLIPTTILSLALYIYFVRVGYGSGLVPLL 136
           IA  LA+PA +A+ R  F G+  +N + ++PL++P  +L +AL   F  VG       L+
Sbjct: 75  IATLLAVPAGMAITRYEFAGRDFLNGLFLSPLIVPHLVLGVALLRLFALVGGTGSFGWLV 134

Query: 137 VGHAIHIMPYAVRILTASLLNFDPSYEEAARNVGAGRIRTLFSVTLPVIRTGLISSLTLC 196
           + HA+ + PY +R++ A+L+ FD S E+AA ++GA +      +TLP+I  G+     L 
Sbjct: 135 MAHALIVTPYTLRLVVAALVGFDRSAEQAALSLGASQATVFRRITLPMILPGVTGGWMLA 194

Query: 197 FILSWNDFPISVFLAPPSWTPLPVELYSYIKFQYDAVAAALASSLILLSAVAMVVIDRLA 256
           FI S+++  +S+F+  PS   LPV +Y Y     D + AA+++ ++ ++A AMV++DR+ 
Sbjct: 195 FINSFDEVTMSIFVTAPSTVTLPVRMYMYATESIDPLMAAVSALMVAVTACAMVLLDRIY 254

Query: 257 GLRRVL 262
           GL RVL
Sbjct: 255 GLDRVL 260