Pairwise Alignments

Query, 264 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 259 a.a., spermidineputrescine ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  143 bits (361), Expect = 3e-39
 Identities = 79/243 (32%), Positives = 135/243 (55%), Gaps = 3/243 (1%)

Query: 20  AFLIFPIAVTLIVAVNPRE-FVLPPNGFTLDWFRAAWSSKTFLRGMGVSLVLGLAAALIA 78
           AFLI P  + +  +++  E    PP G +L W    +  ++F     +S++L +     A
Sbjct: 16  AFLIGPFFIIVAASLSEGETLAFPPQGLSLKWVAKVFEVESFRESFAMSMLLAIGGTAAA 75

Query: 79  NALALPAAIALARTNFPGKGAINLILMTPLLIPTTILSLALYIYFVRVGYGSGL-VPLLV 137
            AL +PA+ AL+R   P    +  ++  P+++P  I+ LAL  Y V V +G  + + L +
Sbjct: 76  LALGIPASYALSRYRLPFGETVRTVVSLPIIVPGIIVGLALLRYLV-VPFGFNITLALFL 134

Query: 138 GHAIHIMPYAVRILTASLLNFDPSYEEAARNVGAGRIRTLFSVTLPVIRTGLISSLTLCF 197
            H   ++PYAVR+++ASL N     EEAA  +G+ R    F V +P IR+G++++  L F
Sbjct: 135 AHTALVLPYAVRVVSASLNNLRSDIEEAAVLLGSSRAGAFFRVVMPNIRSGILAAFILGF 194

Query: 198 ILSWNDFPISVFLAPPSWTPLPVELYSYIKFQYDAVAAALASSLILLSAVAMVVIDRLAG 257
           + S+N  P+S+FL+ P    LP+++ SY++  YD   AAL++ L  +S   + + +R  G
Sbjct: 195 VTSFNQVPVSLFLSGPGVRTLPIDMLSYMEVTYDPSVAALSALLAFMSIGIVFLAERFLG 254

Query: 258 LRR 260
             R
Sbjct: 255 FSR 257