Pairwise Alignments

Query, 304 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 276 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  148 bits (373), Expect = 2e-40
 Identities = 93/270 (34%), Positives = 149/270 (55%), Gaps = 24/270 (8%)

Query: 26  WKTRFAATLLILLVLYCATMIASNPNFGW------DVVADYLFDSRILWGLSLTVWLTVV 79
           ++TR   T   L  L+ +  ++ +  F        ++V  +L  +  L G +LTV+L + 
Sbjct: 23  FRTRLYLTWAALFCLFASFFLSFDLKFSIILDKLPNLVGLHLAPNGFLQGAALTVFLCLC 82

Query: 80  TMVIGVVLGTIFAIMAMADNVVISTVANAYIWFFRGTPVLVQLIFWYNLGALFPQLSVGV 139
            +V   +LG + A+  ++ + V   +A+ Y  FFRGTP+L+Q++  Y LG   PQL +  
Sbjct: 83  AIVASSILGFVTALGRLSKSAVAFGIASFYASFFRGTPLLIQILLIY-LG--LPQLGL-- 137

Query: 140 PFTSLWVSVPTNTLISPVTAAVLGLGLNEGAYMSEIIRSGLMSVDPGQRQAAKSLGMTNG 199
                   VP       + A ++ L LN GAY+SEI R+G++ V  GQR+AA +LGM + 
Sbjct: 138 --------VP-----GAIVAGIIALSLNYGAYLSEIFRAGILGVPHGQREAALALGMRDS 184

Query: 200 KTLWRILLPQAMPVIIPPTGNQTIGMLKTSSLVSVISLADLLYSAQTIYSRNFQTIPLLI 259
              W + LPQAM  IIPP  NQ I MLK SSL+SV+ + ++++ AQ+    +++ I +L 
Sbjct: 185 VIFWHVTLPQAMRTIIPPATNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLT 244

Query: 260 VACIWYLAATTILSAVQVRIERHFARSSQR 289
            A I Y   +  L  +Q R+ERH+ +   R
Sbjct: 245 TAAIIYWVMSLGLELIQARMERHYGKGYVR 274