Pairwise Alignments

Query, 304 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 258 a.a., polar amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  166 bits (421), Expect = 4e-46
 Identities = 98/243 (40%), Positives = 141/243 (58%), Gaps = 14/243 (5%)

Query: 51  NFGWDVVADYLFDSR--ILWGLSLTVWLTVVTMVIGVVLGTIFAIMAMADNVVISTVANA 108
           NF WDV   YL       L GL LT  + V  M++G VLG   A++ ++ N ++      
Sbjct: 2   NFNWDVFWQYLLQPSGVYLTGLWLTCLIAVSAMLLGCVLGLAAALLRLSKNPLLHLPVRF 61

Query: 109 YIWFFRGTPVLVQLIFWYNL---GALFPQLSVGVPFTSLWVSVPTNTLISPVTAAVLGLG 165
           Y+W  RGTP+LVQ++F Y     G +F    + +      + VP N     + AA++ LG
Sbjct: 62  YVWLMRGTPLLVQIVFLYTALAAGGIFRFEDIDL----FGLVVPGN-----IQAAIIALG 112

Query: 166 LNEGAYMSEIIRSGLMSVDPGQRQAAKSLGMTNGKTLWRILLPQAMPVIIPPTGNQTIGM 225
           LNEGAYM+EIIR+G+ +VD GQ +A +SLGM   K + RI+LPQA  VI+PP GN+   M
Sbjct: 113 LNEGAYMAEIIRAGIGAVDKGQYEAGRSLGMGFAKLMRRIVLPQAFRVIVPPLGNEFNVM 172

Query: 226 LKTSSLVSVISLADLLYSAQTIYSRNFQTIPLLIVACIWYLAATTILSAVQVRIERHFAR 285
           LK ++LVSVI + +LL S Q + S  F+   L +V  I++L  TT+    Q  +E  F +
Sbjct: 173 LKNTTLVSVIGVQELLLSTQMVTSATFRVFELYLVVAIYFLMLTTLWGFFQRWLEARFGQ 232

Query: 286 SSQ 288
           S +
Sbjct: 233 SDR 235