Pairwise Alignments

Query, 304 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 222 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  121 bits (303), Expect = 2e-32
 Identities = 75/228 (32%), Positives = 123/228 (53%), Gaps = 23/228 (10%)

Query: 66  ILWGLSLTVWLTVVTMVIGVVLGTIFAIMAM-ADNVVISTVANAYIWFFRGTPVLVQLIF 124
           +L G  +TV +T   + +G VLG +  I  +      I     AY+   RGTP+LVQL  
Sbjct: 15  LLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWIYGACTAYVAAIRGTPLLVQLFI 74

Query: 125 WYNLGALFPQLSVGVPFTSLWVSVPTNTLISPVTAAVLGLGLNEGAYMSEIIRSGLMSVD 184
                     L  G+P   +        L+      VLGLG+  GAY+SEI+R  + S+D
Sbjct: 75  ----------LFFGLPHFGI--------LLPAFLCGVLGLGVYSGAYVSEIVRGAIQSID 116

Query: 185 PGQRQAAKSLGMTNGKTLWRILLPQAMPVIIPPTGNQTIGMLKTSSLVSVISLADLLYSA 244
            GQ  AA+SLGMT G  + +I+LPQA+  +IPP GN+ I ++K S+LVS++++ D+++  
Sbjct: 117 KGQTMAAQSLGMTPGVAMRQIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEG 176

Query: 245 QTIYSRNFQTIPLLIVACIWYLAATTILSAVQVRIERHFARSSQRANI 292
           Q I S +++++ + +   + Y     +L+     I RHF +  ++  +
Sbjct: 177 QKIISVSYRSLEVYLAIAVVYF----VLTGTMTLILRHFEQKLRQGGL 220