Pairwise Alignments

Query, 304 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 226 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  166 bits (421), Expect = 3e-46
 Identities = 93/234 (39%), Positives = 134/234 (57%), Gaps = 18/234 (7%)

Query: 52  FGWDVVADYLFDSRILWGLSLTVWLTVVTMVIGVVLGTIFAIMAMADNVVISTVANAYIW 111
           F +D    Y  +  +L G+ +T+ LT+ T+ IG+ L    A+ +M+ +  +S  A  YIW
Sbjct: 2   FNFDAFLSYFVNPFLLGGVGITIGLTIATIAIGLALALPLALGSMSSHRFLSAPARFYIW 61

Query: 112 FFRGTPVLVQLIFWYNLGALFPQLSVGVPFTSLWVSVPTNTLISPVTAAVLGLGLNEGAY 171
            FRGTP+LVQ++  Y           G+P   L   V        +T+AVL L LNE AY
Sbjct: 62  VFRGTPLLVQIVIIYT----------GLPQLGLRFDV--------LTSAVLALSLNEAAY 103

Query: 172 MSEIIRSGLMSVDPGQRQAAKSLGMTNGKTLWRILLPQAMPVIIPPTGNQTIGMLKTSSL 231
           +SE IR G  ++  GQ +AAK+L ++   TL  + LPQ + VIIPP GN   G+LK +SL
Sbjct: 104 LSETIRGGFSAIAKGQVEAAKALSLSRFATLRLVTLPQVLRVIIPPLGNSVNGLLKATSL 163

Query: 232 VSVISLADLLYSAQTIYSRNFQTIPLLIVACIWYLAATTILSAVQVRIERHFAR 285
            SVIS+ +L+  AQ +    F+ + L  VA  +YL  TT+   VQVR+ERH+ R
Sbjct: 164 ASVISMEELMRRAQVLMQEKFEVLELYCVAACFYLVLTTLWDRVQVRLERHYGR 217