Pairwise Alignments

Query, 304 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 276 a.a., L-lysine ABC transporter, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  125 bits (313), Expect = 1e-33
 Identities = 89/286 (31%), Positives = 145/286 (50%), Gaps = 29/286 (10%)

Query: 8   APTASPDRPMLTYVPASTWKTRFAATLLILLVLYCATMIASNPNFGWDVVADYLFDSRIL 67
           AP  SP +P           +RF  ++ + + L     I      GWD      +    L
Sbjct: 12  APPPSPPKPYTF--------SRFFGSVALGIWLALGVGIFLTVVNGWDPEKFSRYGPSFL 63

Query: 68  WGLSLTVWLTVVTMVIGVVLGTIFAIMAMADNVVISTVANAYIWFFRGTPVLVQL-IFWY 126
            GL +T+ L + ++++G VL    A+  M+ N +   +A AY++FFRGTP++ QL + +Y
Sbjct: 64  SGLGVTLTLVISSILMGAVLSLPVALGRMSKNRLWGWLAYAYVYFFRGTPLITQLFLIYY 123

Query: 127 NLGALFPQL-SVGVP--FTSLWVSVPTNTLISPVTAAVLGLGLNEGAYMSEIIRSGLMSV 183
            LG+  PQL +VG+   F   W              A+    LN  AY +EI+R  + SV
Sbjct: 124 GLGSFRPQLETVGLWWFFRDAW------------NCALFTFTLNTAAYQAEILRGAIESV 171

Query: 184 DPGQRQAAKSLGMTNGKTLWRILLPQAMPVIIPPTGNQTIGMLKTSSLVSVISLADLLYS 243
             GQR+ A +LG+      ++++LPQAM V + P GN+ I M+K S++V+++++ DL+  
Sbjct: 172 PRGQREGAAALGLPERVAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLMGE 231

Query: 244 AQTIYSRNFQTIPLLIVACIWYLAATTILSAV----QVRIERHFAR 285
            +  +SR F    + I A I YL    +L  +    + R+ RH  R
Sbjct: 232 TRRAFSRTFD-YQMYIWAAILYLLMVELLRNIWGWLEARLTRHLKR 276