Pairwise Alignments

Query, 409 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 298 a.a., Tyrosine recombinase XerD from Pseudomonas putida KT2440

 Score = 74.7 bits (182), Expect = 3e-18
 Identities = 85/303 (28%), Positives = 131/303 (43%), Gaps = 31/303 (10%)

Query: 113 ASPYPLLDDYQSWLRVHRGLAERTIARHLRHL---HKLLPELGTPTLDYDAALIRNVVRE 169
           A  +PL+D +   L + +GL++ T   +   L   +  L E      D    LI + +  
Sbjct: 3   ALDHPLIDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQEHSVSLPDAGRDLILDHLA- 61

Query: 170 WRERTG--PADLRTITSALRSYLRFLAGVGLCRPNLDHAIPPVLQWRLSSL----PRYLA 223
           WR   G  P       S LR + R+L    L       AI P LQ  +  L    P+ L+
Sbjct: 62  WRLDQGYKPRSTARFLSGLRGFFRYLLREKLV------AIDPTLQVDMPQLGKPLPKSLS 115

Query: 224 AADVERVIASCDQLTRGRLRDRAILLLLARLGLRAGDVAGLRLSDIEWTSGMLRLSGKAR 283
            ADVE ++ + D       RDRA+L +L   GLR  ++  L L  +    G+LR+ GK  
Sbjct: 116 EADVEALLQAPDLGEAIGQRDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLRVMGKGS 175

Query: 284 RQVRLPLPQDVGDALLAYIEQERPRMHQEAVFLT-----MIAPYRSFAQSSHVS--TIVA 336
           ++  +P+ ++      A +  ER +    A  L      ++ P +   Q +  +    + 
Sbjct: 176 KERLVPMGEE------AVVWLERYQRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIK 229

Query: 337 LALKRAGISDPPSTGACLLRHSAATSMLRSGATLEAVGTVLRHRSLDMTAHYAKVDAAML 396
              + AGI  P S     LRH+ AT +L  GA L  V  +L H  L  T  Y  V  A L
Sbjct: 230 HHARVAGIDKPLSPHT--LRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARL 287

Query: 397 EQV 399
           +Q+
Sbjct: 288 QQL 290