Pairwise Alignments

Query, 409 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 300 a.a., Tyrosine recombinase XerC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 75.1 bits (183), Expect = 3e-18
 Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 14/281 (4%)

Query: 125 WLRVHRGLAERTIARHLRHLHKLLPELGTPTL----DYDAALIRN-VVREWRERTGPADL 179
           +L V R L+  T+  + R L  ++   G   L      DAA++R+  VR  R+  GPA L
Sbjct: 16  YLGVERQLSPITLLNYQRQLDAIIALAGETGLKSWQQCDAAIVRSFAVRSRRKGLGPASL 75

Query: 180 RTITSALRSYLRFLAGVGLCRPNLDHAIPPVLQWRLSSLPRYLAAADVERVIASCDQLTR 239
               SALRS+  +L   G  + N    +      R   LP+ +   DV R++   D    
Sbjct: 76  ALRLSALRSFFDWLVSQGELKANPAKGVSAPKAPR--HLPKNIDVDDVNRLL-DIDLNDP 132

Query: 240 GRLRDRAILLLLARLGLRAGDVAGLRLSDIEWTSGMLRLSGKARRQVRLPLPQDVGDALL 299
             +RDRA+L ++   GLR  ++ GL +  ++  +G + + GK  ++ RLP+ ++    + 
Sbjct: 133 LAVRDRAMLEVMYGAGLRLSELVGLDIKHLDLDTGEVWVMGKGSKERRLPIGRNAVTWIE 192

Query: 300 AYIE-QERPRMHQEAVFLTMIAPYRSFAQSSHVSTIVALALKRAGISDPPSTGACLLRHS 358
            +++ +      +EA+FL+ +    S   + +V    A    + G++         LRHS
Sbjct: 193 HWLDLRGLFASDEEALFLSKLGKRIS---ARNVQKRFAEWGIKQGLNS--HVHPHKLRHS 247

Query: 359 AATSMLRSGATLEAVGTVLRHRSLDMTAHYAKVDAAMLEQV 399
            AT ML S   L  V  +L H +L  T  Y  +D   L  V
Sbjct: 248 FATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASV 288