Pairwise Alignments

Query, 409 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 581 a.a., site-specific tyrosine recombinase XerC from Dickeya dianthicola ME23

 Score = 78.2 bits (191), Expect = 6e-19
 Identities = 85/308 (27%), Positives = 146/308 (47%), Gaps = 27/308 (8%)

Query: 118 LLDDYQSWLRVHRGLAERTIARHLRHLHKLLPELGTPTLDYDAALIRNVVR-------EW 170
           LL  + +W R  R  +E T+     H ++ +       L Y   +   ++        ++
Sbjct: 175 LLLRFVAWRR-ERNWSETTLKTQTHHQYRFILWAAERGLHYGRDITLPILEHYQRHLYQY 233

Query: 171 RERTG-PADLRTITSALRSYLRFLAGVGLCRPNL---DHAIPPVLQWRLSSLPRY-LAAA 225
           R+  G P   RT  S L   + +     + R +L   D A   VL      LPR+ L+ A
Sbjct: 234 RKPNGEPLSTRTQRSQLGPLVVWFGW--MTRHHLLLADPASGLVLPRLEKRLPRHILSVA 291

Query: 226 DVERVIASCDQLTRGRLRDRAILLLLARLGLRAGDVAGLRLSDIEWTSGMLRL-SGKARR 284
           DVE+V+A  D  T   +RDRA++ LL   G+R G+VA L +  ++ +  ++ +  GK ++
Sbjct: 292 DVEQVLALPDLTTLQGIRDRALMELLWSTGIRRGEVAVLEVYSVDASRHIVTIVQGKGKK 351

Query: 285 QVRLPLPQDVGDALLAYIEQERPRM----HQEAVFLTMIAPYRSFAQSSHVSTIVALALK 340
              +P+ Q     L  Y++  RP++    H  A+F+ +          + ++ +V+  +K
Sbjct: 352 DRVIPVGQRALRWLAYYLQAVRPQLLVNPHCPALFVALDGI--EGLTPNGITNLVSHYIK 409

Query: 341 RAGISDPPSTGAC-LLRHSAATSMLRSGATLEAVGTVLRHRSLDMTAHYAKVDAAMLEQV 399
            +GI+     G+C L RH+ AT ML +GA L  +  +L H S++ T  Y +V    L+ V
Sbjct: 410 ASGIA---KWGSCHLFRHAMATQMLENGADLRWIQAMLGHASVESTQIYTQVSIRALQAV 466

Query: 400 -AQPWPGE 406
            A   P E
Sbjct: 467 HASTHPAE 474