Pairwise Alignments

Query, 409 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 422 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  119 bits (298), Expect = 2e-31
 Identities = 81/282 (28%), Positives = 142/282 (50%), Gaps = 15/282 (5%)

Query: 127 RVHRGLAERTIARHLRHLHKLLP---ELGTPTLDY-DAALIRNVVREWRERTGPADLRTI 182
           R  RG++  ++  + RHL++ +    + G  ++ Y D  L+ + + ++       D +T+
Sbjct: 124 RQQRGMSRSSLHNYQRHLYEFMEYCEKRGIGSVGYIDLPLLLHFINQYN-----CDKKTV 178

Query: 183 T----SALRSYLRFLAGVGLCRPNLDHAIPPVLQWRLSSLPRYLAAADVERVIASCDQLT 238
                S LR +LR+L    L   +    +P   +     +P   +  +VE++IAS D+ +
Sbjct: 179 MIVLISTLRIFLRYLFKENLTAIDYSSKVPRCKKVTQPKIPSLYSKEEVEKLIASVDRSS 238

Query: 239 RGRLRDRAILLLLARLGLRAGDVAGLRLSDIEWTSGMLRLSG-KARRQVRLPLPQDVGDA 297
               R+ AI++L ARLGLRA D++ L+  ++ W +  + +   K    ++LPL  DVG+A
Sbjct: 239 PTGKRNYAIIMLAARLGLRASDISRLKFKNLHWNTSTIEIDQVKTGNPLQLPLLPDVGNA 298

Query: 298 LLAYIEQERPRMHQEAVFLTMIAPYRSFAQSSHVSTIVALALKRAGISDPPST-GACLLR 356
           ++ Y++  RP   +  VFLT   PY  F  S+ V+ +V  A+ +AGI       G   LR
Sbjct: 299 IIDYLQYGRPVSEEPHVFLTGRPPYGCFTTSNVVTHVVQRAIIKAGIDTKNRRFGPHSLR 358

Query: 357 HSAATSMLRSGATLEAVGTVLRHRSLDMTAHYAKVDAAMLEQ 398
           HS    ML     L  +  V  H+S + T  Y ++D   ++Q
Sbjct: 359 HSLGFRMLEKSTMLPVISEVFGHKSSESTRFYLRIDLTSMKQ 400