Pairwise Alignments

Query, 304 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 285 a.a., integrase from Magnetospirillum magneticum AMB-1

 Score = 59.7 bits (143), Expect = 8e-14
 Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 32/230 (13%)

Query: 62  NRLLTVRRFALSLHAEDPRHEVPSADLFGRASRKRRTPYIYSPEEIRRLIDAARRLGPDD 121
           N+ +   RF   +    P  E+P   ++ R  + RR P + S +E+ R ++A        
Sbjct: 69  NQFVAALRFFYGVTLRCP--EIPERIVYAR--QPRRLPIVLSADEVVRFLEA-------- 116

Query: 122 SIRSLTYATMFGLIAATGMRVSEAIAIRLHDVTDDGLII--AQTKFKKSRLLPLHTTTRR 179
            + SL   T      ATG+RVSE +A++L D+    ++I   Q K +K R + L      
Sbjct: 117 -VPSLKNRTALTTAYATGLRVSEVVALKLADIDSGRMVIRVEQGKGRKDRYVMLSA---- 171

Query: 180 ALDGYLATRLKAASQSDALFISHQGTPLAYPTVITVFLQIIRSIGLRGAPGSRGPRIHDL 239
            L G L T    A     LF   +  P+  PTV+       RS  +      R   +H L
Sbjct: 172 QLLGILRTYWPLARPEHWLFPGREDKPIE-PTVLN---SACRSACVAAGIDKR-VTVHTL 226

Query: 240 RHTFAVRSLEHCAHDSQAVARHITALSTYLGHAHVTDTYWYLQSTPELMA 289
           RH+FA   LE            I  +   LGH +++ T  Y Q +  ++A
Sbjct: 227 RHSFATHLLE--------AGTDIRIIQVLLGHNNLSTTARYTQVSNAMIA 268