Pairwise Alignments

Query, 304 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 299 a.a., tyrosine recombinase XerC subunit from Kangiella aquimarina DSM 16071

 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 59/264 (22%), Positives = 107/264 (40%), Gaps = 28/264 (10%)

Query: 27  LRNFVAFAEHRGEH---VITTATVH----EWALQAPSPEQRRNRLLTVRRFALSLHAEDP 79
           L   +AF ++ G +    ITT  +     +   Q  SP      L   RRF L     + 
Sbjct: 30  LEKLLAFCQNAGYNNWQQITTQDIRMLIAKQHRQGASPATCALLLSASRRF-LEFLLSEK 88

Query: 80  RHEVPSADLFGRASRKRRTPYIYSPEEIRRLIDAARRLGPDDSIRSLTYATMFGLIAATG 139
           + ++ SA       + +R P     + +   +D      P+D    +    M  L+ ++G
Sbjct: 89  KIKLNSAVGVRGPKKAKRLPKNIDVDSLNHFLDQM----PEDESLQIRDKAMMELLYSSG 144

Query: 140 MRVSEAIAIRLHDVT-DDGLIIAQTKFKKSRLLPLHTTTRRALDGYLATRLKAASQSD-- 196
           +R++E   + ++D++  D ++    K  K R +P   + ++ L  ++  R +    +D  
Sbjct: 145 IRLAELSGMDVNDLSFSDQILRVLGKGNKIREVPFGNSAKKILTIWIKERNQLVKSADEK 204

Query: 197 ALFISHQGTPLAYPTVITVFLQIIRSIGLRGAPGSRGPRIHDLRHTFAVRSLEHCAHDSQ 256
           ALF+S QG  L    +        + +GL           H LRH+ A   LE       
Sbjct: 205 ALFVSQQGNRLTNRAIQQRLSHWGKQLGLNDR-----LHPHKLRHSCATHVLES------ 253

Query: 257 AVARHITALSTYLGHAHVTDTYWY 280
             +  + A+   LGHA ++ T  Y
Sbjct: 254 --SSDLRAVQELLGHASISTTQIY 275