Pairwise Alignments

Query, 304 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

 Score = 50.8 bits (120), Expect = 4e-11
 Identities = 60/227 (26%), Positives = 86/227 (37%), Gaps = 21/227 (9%)

Query: 64  LLTVRRFALSLHAEDPRHEVPSADLFGRASRKRRTPYIYSPEEIRRLIDAARRLGPDDSI 123
           L  +RR    L+ E  R + PSA L        + P     +     +DA       D  
Sbjct: 77  LSAMRRLFQYLYREKQRTDDPSAPL-----SSPKLPQRLPKDLTEAQVDALLAAPVTDQP 131

Query: 124 RSLTYATMFGLIAATGMRVSEAIAIRLHDVT-DDGLIIAQTKFKKSRLLPLHTTTRRALD 182
             L    M  L+ ATG+RVSE + + + DV+   G++    K  K RL+PL       L+
Sbjct: 132 IELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLVPLGEEAVYWLE 191

Query: 183 GYLATR---LKAASQSDALFISHQGTPLAYPTVITVFLQIIRSIGLRGAPGSRGPRIHDL 239
            YL      L      D LF S++   +   T    F   I+      +  S     H L
Sbjct: 192 QYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQT----FWHRIKHYATLASIDSNKLSPHVL 247

Query: 240 RHTFAVRSLEHCAHDSQAVARHITALSTYLGHAHVTDTYWYLQSTPE 286
           RH FA   L H A         +  +   LGH+ ++ T  Y     E
Sbjct: 248 RHAFATHLLNHGA--------DLRVVQMLLGHSDLSTTQIYTHVATE 286