Pairwise Alignments

Query, 304 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 327 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 79/293 (26%), Positives = 123/293 (41%), Gaps = 18/293 (6%)

Query: 16  LGFKFRTPGVLLRNF--VAFAEHRGEHVITTATVHEWALQAPSPEQ--RRNRLLTVRRFA 71
           LGFK+ T    L     +A    +    IT A    WA + P+  +    +R+L + + +
Sbjct: 23  LGFKYVTETFALSKIDDLATQTRQTSQGITKAFADMWAEKRPNESRGYHYHRMLMLVQLS 82

Query: 72  LSLHAEDPRHEVPSADLFGRASRKRRTPYIYSPEEIRRLIDAARRLGPDDSIRS---LTY 128
             ++       +P    F         PY+YS +EI  L  A   L    + R       
Sbjct: 83  SYINDIGIESYIPKLPRF---PENTFIPYVYSRDEIAMLFKACDELRMQIAHRESCLFCM 139

Query: 129 ATMFGLIAATGMRVSEAIAIRLHDVT-DDGLI-IAQTKFKKSRLLPLHTTTRRALDGYLA 186
             +  L+ ATG+R+ EA+ ++  DV  +DG I I  +K KK R +P+  +       YL+
Sbjct: 140 PVLLRLLYATGIRIGEALDLKDEDVNLEDGYIRIQDSKNKKQRAIPISASLNLVCKEYLS 199

Query: 187 TR--LKAASQSDALFISHQGTPLAYPTVITVFLQIIRSIGLRGAPGSRGPRIHDLRHTFA 244
            R  L   + +   F  +             F + +    +       GPRIHDLRHTFA
Sbjct: 200 YRAWLPYKNSTTGFFFVNVSGNKCGQGFRKWFRKCLEHANIPYLGEKHGPRIHDLRHTFA 259

Query: 245 VRSLEHCAHDSQAVARHITALSTYLGHAHVTDTYWYLQST----PELMAHMSE 293
           V SL   A     +   +  LS YLGH  +  T  Y++ T    P+L+  M +
Sbjct: 260 VNSLAGMAEAGIDLYASLPILSNYLGHQSIGATDHYVRLTASMFPDLIRDMDK 312