Pairwise Alignments

Query, 304 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 301 a.a., tyrosine recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 23/219 (10%)

Query: 67  VRRFALSLHAEDPRHEVPSADLFGRASRKRRTPYIYSPEEIRRLIDAARRLGPDDSIRSL 126
           V+ F   +  ED   E P A L       R+ P   S EEI +L++  + LG  +  R+ 
Sbjct: 82  VKAFFKFMVYEDKLEEDP-AILLEAPKLGRKLPDTLSYEEIVKLLEGIK-LGTPEGHRN- 138

Query: 127 TYATMFGLIAATGMRVSEAIAIRLHDV-TDDGLIIAQTKFKKSRLLPLHTTTRRALDGYL 185
               M  ++ ++G+RVSE + ++L  V +D G +    K  K RL+P+     R L  YL
Sbjct: 139 --RAMLEVLYSSGLRVSELVELKLGMVYSDIGFLRILGKGNKERLVPVGKDALRYLKLYL 196

Query: 186 AT----RLKAASQSDALFISHQGTPLAYPTVITVFLQIIRSIGLRGAPGSRGPRIHDLRH 241
                 +  A    + +F++ +G  +    V     +++  +G++     +    H  RH
Sbjct: 197 DEVRNHQKIAPGHEEYVFLNRRGKKMTRVMVFIFIKKLVEEVGIK-----KKVSPHTFRH 251

Query: 242 TFAVRSLEHCAHDSQAVARHITALSTYLGHAHVTDTYWY 280
           +FA   +E  A         + A+   LGH  +T T  Y
Sbjct: 252 SFATHLIEGGA--------DLRAVQEMLGHESITTTEIY 282