Pairwise Alignments

Query, 329 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 239 a.a., integrase/recombinase from Sinorhizobium meliloti 1021

 Score =  137 bits (345), Expect = 3e-37
 Identities = 88/235 (37%), Positives = 130/235 (55%), Gaps = 11/235 (4%)

Query: 99  PAVLDQALRVHAMPMKKIDEALVASLSRTEVQALLNAPDRRSLSGIRDRAMLHLAFAGGL 158
           PA    A RV  +P+K+    ++  L+  EV A++ APD+R+  G RDRA L      G 
Sbjct: 6   PASFGVAQRVLTIPIKRAHIEVIHHLTNAEVDAVIAAPDQRTPRGRRDRAFLLFLARTGA 65

Query: 159 RVSELVGLTLDQFDGRSPAS-IHIIGKGRRERVLPLWQETAAAIRAWIAVR--PKNGDTA 215
           RVSE +G+  D      P S + + GKGRR+RV+P+ Q+ A A+ A +  R    +    
Sbjct: 66  RVSEAIGVNADDLQLERPRSQVLLHGKGRRDRVIPVPQDLARALAALLRERGIANHEPRP 125

Query: 216 LFLNNAGRMMTRSGFEYILEKHAAAAVSVAPTLATKSISPHVLRHSCAMHMLQATRDIRK 275
           +F+      +TR G  +I+ + AA AV++ P LA K ISPH+ RHS AM +LQ+  D+  
Sbjct: 126 IFIGAHNERLTRFGATHIVRRAAAMAVAIRPDLAGKPISPHIFRHSLAMKLLQSGVDLLT 185

Query: 276 VALWLGHASLQSTEIYLRADPTEKLEML-DALAPLGIKPG---KFRPPDKLIAML 326
           +  WLGHA + +T  Y  AD    +EM+ + L   GI+      FRP D ++ ML
Sbjct: 186 IQAWLGHAQVATTHRYAAAD----VEMMRNGLEKAGIEDDYRTHFRPTDAVLQML 236